Citrobacter koseri: CKO_04472
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Entry
CKO_04472 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cko03000
]
CKO_04472
Transcription factors [BR:
cko03000
]
Prokaryotic type
Other transcription factors
Others
CKO_04472
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
AAA_2
AAA_5
PAS_8
AAA_16
AAA_7
PAS_7
HTH_50
Xre-like-HTH
PAS_9
AAA
Motif
Other DBs
NCBI-ProteinID:
ABV15527
UniProt:
A8APW4
LinkDB
All DBs
Position
complement(4135013..4136938)
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AA seq
641 aa
AA seq
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MTAQTQDIGKEVSSVIAQSWHRCSKFMQRETWQTPHQAQGLTFESICRRKTALLTIGQAA
LEDAWEFMDGRPCALFILDESACILNRCGDPGTLEKLAELGFLDGSYCAESIIGSCALSL
ATMPGQPTKTAGEQHFKQALHPWSFCSTPVFDNHGRLFGSISLCCLVEHQSVSDLSLTLA
IAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAATMLHLDT
QASQGKNIHDLVNLPALLRRAIKHARGLSHVEVTFESQHQFVDAVITLKPIVEEQGNSFI
LLLHPVEQMRQLMTSQLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPVLLCGEEGVG
KELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGRLSRLELASGGTL
FLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ
LYYALHSFEIIIPPLRARRNSIPSLVYNRLNGLKKRFSTSLKVDDDALAQLVAYSWPGND
FELNSVIENIAISSDNGHIRLSNLPEYLFSERPGVDTTSSLLPASLTFTAIEKEAIIHAA
RVTSGRVQEMSHLLNIGRTTLWRKMKQYDIDASQFKRKHHD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcagacgcaggacatcgggaaggaagtatcttccgtcatcgctcagtcatgg
catcgttgcagcaagtttatgcagcgagaaacctggcagacgccgcaccaggcgcaaggg
ctgacctttgaatcgatttgccgacgcaaaacggcgttgctgacgataggccaggctgcg
ctggaagatgcctgggagttcatggatggacgaccttgcgcgctgtttatcctggatgaa
tccgcctgtatcttaaaccgctgcggcgaccccgggacgctggagaaactggcggaactg
ggctttctcgacggcagctattgtgcggaaagcatcatcggcagctgtgcgctgtcgctg
gcgaccatgccggggcaaccaaccaaaacggccggagagcagcattttaaacaggcgctg
catccgtggtcattctgctcaaccccggtatttgataatcacggccgcctgtttggctcc
atttcgctctgctgtctggtggagcaccagtcagtttctgatttatcgctgacgctggcg
atcgcccgtgaagtgggaaattcactgttaactgatagcctgttggccgagtctaatcgt
catctgaatcagatgtacgggctgctggaaagcatggatgatggcgttatggcgtggaac
gagcagggcgtgttgcagtttctcaacgcgcgggcggccacgatgctgcatctggatacg
caggccagccaggggaaaaacatccatgatctggtcaatttgcctgccttgctgcgtcgc
gccattaaacacgcccgcgggttgagccatgtcgaagtgacttttgaaagtcagcatcag
tttgttgatgccgtcattaccctgaaaccgatagttgaggagcagggcaacagctttatt
ctgctgctgcacccggtggagcaaatgcgccagttgatgaccagtcaactggggaaagtg
agccatacctttgaacagatgtcgacggacgatccagaaacacgtcggttgatccacttt
ggccgccaggcggcgagggggagcttcccggttctgctgtgtggtgaagaaggggtgggc
aaagagcttctcagccaggctatccacaacgaaagcgagcgcgcgagcgggccttatatc
gccgtaaactgccagctctatgccaatagcgtactggggcaggattttatgggcagtgcg
ccaaccgatgatgaaaatggtcgtctgagccgccttgaactggcgagcggtggcacgctg
tttctggaaaaaattgaatatctggcgccggagttgcagtccgcgctgctgcaagtgatc
aagcagggcgtgttaacccgccttgacgcgcgacgtctgatcccggtggatgtgaaagtg
atcgcgacgaccacggttgatctggcgaatctggtcgagcagaaccgctttagccgtcag
ctttactatgccctgcattcgtttgaaattattattcctccgctgcgcgcgcggcgtaac
agcatcccttcgctggtctataaccggctgaacggcctgaaaaaacgcttttcaaccagc
ctgaaggtggatgatgatgcgctggcgcaattggtggcctattcctggccgggcaatgac
ttcgagctgaacagcgtcatcgaaaacattgctatcagcagcgataacggccacatccgc
ctgagtaatctgccggaatatctgttttctgaacgccccggcgtggatacgacatcatcg
ctgctacccgccagtctgacgtttacggctatcgagaaagaggcgattatccatgccgcc
cgcgtcaccagcggacgggtgcaggaaatgtctcatttgctgaacattggccgcactacg
ctgtggcgtaagatgaagcagtacgacatcgacgccagccagttcaagcgcaagcatcac
gactag
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