Cedecea lapagei: NCTC11466_04526
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Entry
NCTC11466_04526 CDS
T05810
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
clap
Cedecea lapagei
Pathway
clap00540
Lipopolysaccharide biosynthesis
clap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC11466_04526 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clap01005
]
NCTC11466_04526 (rfaF)
Enzymes [BR:
clap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC11466_04526 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
clap01005
]
Core region
NCTC11466_04526 (rfaF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
VEC01951
UniProt:
A0A3S4KXC5
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All DBs
Position
1:4546651..4547700
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AA seq
349 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIAMPLG
HGALELGERRRLGHSLRDKRYDRAYVLPNSFKSALVPFFAGIPHRTGWLGEMRYGLLNDS
RKLDKKAWPLMVERYVALGYDKGVMQSAKDLPQPLLWPKLQVNEGEKAQACAAFNLEQQR
PMIGFCPGAEFGPAKRWPHYHYAALAAKLIDSGYQVVLFGSVKDKDAGKEILAALTSEQQ
AWCRNLAGDTQLEQAVILLSACQGVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH
KARVIRLISGYHKVRKGDAAEGYHQSLIAITPDSVLVALTELLTGSKED
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggtgattggcccgtcatgggtgggcgacatgatgatgtcgcaaagtctc
tatcgcacgctcaaggcgcgttatccccaggcgataattgacgtgatggcgcccgcatgg
tgccgtccgctgttatcgcgcatgccggaagttaacgaagccatcgccatgccacttggt
cacggcgctttggaactgggtgaacgccgccgcctcggccatagtctgcgagataaacgc
tacgatcgcgcctatgtgctgccaaactcctttaagtccgcgctggtgcccttctttgcc
ggtatcccccaccgcacgggctggctgggtgaaatgcgctatggcctgctgaatgacagc
cgcaagctggacaaaaaggcctggccattgatggtggagcgctatgtcgcattaggttac
gacaaaggcgtcatgcagtcggctaaagatctgcctcagccgctgctgtggccaaaatta
caggttaatgaaggtgagaaagcccaggcttgcgccgcttttaacctcgaacagcagcgc
ccgatgatcggtttctgcccgggagccgagttcggcccggcaaagcgctggccgcactat
cattatgctgcgctcgctgcgaagctcattgattcaggctatcaggttgttctttttggc
tcggtcaaagataaagacgccgggaaagagattctggccgcccttaccagcgaacagcag
gcgtggtgccgtaaccttgccggggatacccagcttgaacaggccgtgattttgctctcc
gcgtgtcagggtgttgtcaccaacgactctggcctgatgcacgttgcagccgcgcttgac
cgccctctggtggcgctttatggcccaagcagccctgatttcacgccgccgctctcccat
aaagccagggtcattcgcctgattagcggctaccataaagtacgcaagggcgatgccgca
gaagggtatcatcagagcctgatcgctattactcccgatagcgtgctggttgcgttaacc
gaactgctaaccggcagtaaggaagactga
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