Clostridium sporogenes: CLSPO_c35430
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Entry
CLSPO_c35430 CDS
T03905
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
cld
Clostridium sporogenes
Pathway
cld03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSPO_c35430 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c35430 (uvrB)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSPO_c35430 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLSPO_c35430 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
BrxC_BrxD
SWI2_SNF2
4HB_MCP_1
Lipase_GDSL
Motif
Other DBs
NCBI-ProteinID:
AKC64233
UniProt:
A0A7X5SY87
LinkDB
All DBs
Position
complement(3874051..3876039)
Genome browser
AA seq
662 aa
AA seq
DB search
MSQFKVISKFNPTGDQPKAIKSIAKGIENGEKFQTLIGVTGSGKTFTMANIIEKVQKPTL
VLAHNKTLAAQLCSEFRDFFPNSAVEYFVSYYDYYQPEAYVAQSDTYIEKDASINDEIDK
LRHSATAALFERRDVIIVASVSCIYGLGNPEEYKKLTISLREGMEKDRDEIIKKLVEIQY
ERNDIDFSRGTFRVKGDVLDIFPAASSNKAIRVEFFGDEIDRIKEFDSLTGETITKLKHV
SIFPASHFATSKDRLEIAIKSIEEELEERVKELVSQDKILEAQRLKQRTNFDIEMMREVG
YCTGIENYSRVLDGRAKGTSPQTLLDYFPDDFLLFIDESHVTLPQVKAMQAGDKSRKDSL
VEYGFRLPCAYDNRPLTFNEFENKLNQVVFVSATPAKYELEHSTNTAEQVIRPTGLLDPE
IIVKPVKGQIDDLYANIQETIKRGFRILVTTLTKKMAEDLTDYLKEMGIKTRYLHSDIDT
IERMKIIHDLRKGEFHVLVGINLLREGLDIPEVALVTILDADKEGFLRSETSLIQTVGRA
ARNSESKVIMYGDVITKSMERTIKETNRRRKIQMEYNEKHGIVPKTIIKDIREVIQISDI
AEEREEYDNLNEALKSYNNDIDKLIEQYEKEMREAAQNLQFEKAAHLRDVIYKLKKDKET
EF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtttaaggtaatttcaaaatttaatcctacaggagatcagcctaaagctata
aaatctattgctaaaggtatagaaaatggggaaaaatttcaaacgttaataggtgtaaca
ggatcaggtaaaacttttactatggcaaatattatagaaaaagttcaaaaacctacttta
gttttagctcataataaaacactagcagcacaattatgctcagagtttagagattttttc
cctaatagtgcagtggaatatttcgtatcttattatgactattatcaaccagaagcatat
gtagctcaaagtgatacatacatagaaaaggatgcatctataaatgatgaaatagataaa
ttgagacattcagctacagcagctttatttgagagaagagatgtaataattgtagcttct
gtgtcctgtatatatggacttggtaatccagaagagtataaaaaattaaccatatcttta
agagaaggaatggaaaaagatagagatgaaattattaaaaaattagtagagatacaatat
gaaagaaatgatattgatttttctagaggtacctttagagttaagggtgatgtgttagat
attttccctgctgcatctagcaataaggcaataagggttgaattttttggggatgaaata
gatagaataaaggaatttgattcattaacaggagaaaccataactaaattgaaacatgta
tcaatattcccagcttcccactttgcaacttcaaaggataggttagaaattgctataaaa
agtatagaagaagaactagaagaaagagtgaaagagctagtatcacaagataaaatatta
gaagctcaaaggttgaaacaaagaactaattttgatatagaaatgatgagagaagttgga
tattgtacaggcatagaaaattattcgagagtattagatggaagagctaaaggaacatca
cctcagacattattagattattttcctgatgattttcttctttttatagatgaaagccat
gtaactttgccacaggtaaaagctatgcaggcaggagataaatctagaaaggattctttg
gtggaatatggatttaggttgccttgtgcttatgataataggcctcttacttttaatgag
tttgaaaataaattaaatcaagtagtttttgtaagtgctacaccagcaaaatatgaatta
gaacattctactaatacagcagaacaagttataaggcctacaggacttctagatcccgaa
ataattgttaaaccagtgaagggtcagatagatgatttatatgctaacatacaggaaaca
attaaaagaggatttagaattttagtaactacattaacaaaaaaaatggcagaagacttg
acagattatttaaaagagatgggaataaaaactagatacttacattcagatatagatact
atagaaagaatgaagataatacatgatcttagaaaaggagaatttcatgttttagtagga
ataaacttactaagagaaggattggatataccagaagtagctttagttacaatattagat
gcagataaagagggatttttaagatcagaaacctctcttatacagaccgttggaagggca
gcaagaaactctgaaagtaaggtaattatgtatggagatgttataactaaatccatggaa
aggactataaaagaaactaacagaagaagaaaaatacaaatggaatataatgaaaaacat
gggattgttcctaaaactataataaaagatataagagaagtaattcaaataagcgatata
gcagaggaaagagaagaatatgacaatttaaatgaagcattaaaatcttataataatgat
atagataaattaatagaacaatacgaaaaagaaatgagagaggcagcacaaaatttacag
tttgaaaaagcagctcatttgagagatgtaatatacaaattaaaaaaagataaagaaaca
gaattttaa
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