Cellulosilyticum lentocellum: Clole_2409
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Entry
Clole_2409 CDS
T01448
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clole_2409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cle03019
]
Clole_2409
03016 Transfer RNA biogenesis [BR:
cle03016
]
Clole_2409
Enzymes [BR:
cle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Clole_2409
Messenger RNA biogenesis [BR:
cle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Clole_2409
Transfer RNA biogenesis [BR:
cle03016
]
Prokaryotic type
tRNA degradation factors
Clole_2409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
Ribosomal_L6
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADZ84115
UniProt:
F2JSZ4
LinkDB
All DBs
Position
complement(2646377..2648494)
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AA seq
705 aa
AA seq
DB search
MVKKYSTQLAGRELSVEIGKVAGLANGSATVRYGDTMILATVVAADAPKEGIDFFPLSVN
YEEKFYSVGRLPGGYIKRESRPSEKAILTSRVIDRPMRPLFPKDYRNDVVITTTVLSVDQ
DCSPEVTAMIAASLVVDISDIPFAGPVGSVQVGLVDGNLVFNPNQEERQKSDLALTVSST
KDKVMMIEAGANEVPEDIMFDAIMKGHEFNQQVVQFIEAIKADCGKAKNEDYVKFGVPAE
IYNEIVSHIGDKQMEEAVFTDDKQVREVQLKALKEKVIVALTEAGKEEDLVYLEEAFYQF
EKKTVRRMILKESKRPDGRALDEIRSLAAEVDLVPRVHGTGLFTRGQTQVLTVTTLAALS
EMQTLDGLDELEISKRYMHHYNFPPYSVGEARAPRAPGRREIGHGALAERALVPVLPTEQ
EFPYAIRTVSEVLSSNGSTSQASICGSTLSLMAAGVPIKAPVAGISVGLVTGETADDFVL
LTDIQGLEDFFGDMDFKVGGTHKGITAIQMDMKIKGLTPEIIKGALENTKKARFYILDEI
MLKAIPAVRDHLSPYAPVITQITIDPEKISEVIGPKGKMINRIIEETGVKIDIEDDGRVF
ICGSDADKAQKAIQMIEGIARPIEEGQEFDGKVMRLMNFGAFVELVPGKEGLVHISQLAH
ERVAKVEDVVAVGDSIKVKVIEIDKQGRINLSHKVLLPKPEKEKE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaatattcaacccaattagctggaagagaactttcagtagaaattggaaaa
gtagcaggccttgcgaatggttcagcaacagtaagatatggtgacacgatgattttagca
acagttgttgcagcagatgcacctaaagagggcatcgatttcttccctttaagtgttaac
tatgaagaaaaattctattctgtaggtagattaccaggtggttatattaaacgtgagtct
agaccttcagaaaaagctattttaacatcaagagttattgatagaccaatgcgtccatta
tttcctaaagattatcgtaatgatgttgtgattacaacaactgtactatctgtagatcaa
gactgtagtccagaagtaacagctatgattgcagcatctttagtagtagatatatctgat
attccttttgcaggtccagtaggttctgtacaagtgggattggtagatggtaatcttgta
tttaacccaaatcaagaagaacgccaaaaatcagacttagctcttacggtttcttcaact
aaagataaagtcatgatgattgaagcaggtgccaatgaagtacctgaagatataatgttt
gatgccattatgaagggccatgagtttaatcaacaggtagtacagtttattgaagcaatt
aaggcagactgtggaaaagctaaaaatgaggattatgttaaatttggtgtaccagctgag
atttataatgaaatagtttctcatattggcgataaacaaatggaagaagcagttttcact
gatgataaacaagtaagagaagtacaactgaaggcattaaaagagaaggttattgtagct
ttaactgaagctggtaaagaagaggatttagtttatctagaagaagctttctaccaattt
gaaaagaaaacagttagacgtatgattttaaaagagtcaaagcgtccagatggtcgtgca
ttagatgaaatcagatcacttgcagcagaagtagatttagtgccacgtgttcatggtaca
ggtttattcactagaggccaaacacaagtgcttactgtaacaactttagcagctttatct
gaaatgcagactttagatggattagatgaattagaaatttctaaacgttacatgcatcac
tataattttccaccttattctgtaggagaagcaagagcaccacgtgctccaggacgtcgt
gaaattggacatggtgctttagcagaacgtgcattagtgcctgtattaccaactgaacaa
gaattcccatatgctattcgtactgtatcagaagtacttagctcaaatggatcaacttca
caagcaagtatctgtggttcaactttatcattaatggctgcaggtgtacctattaaagca
ccagttgctggtatttcagtaggacttgtaacaggagaaacagctgatgatttcgtactt
cttacagacattcaaggattagaagatttctttggagacatggactttaaagtgggtggt
acacacaaagggattacagctattcaaatggatatgaagatcaaaggtcttacacctgaa
attattaaaggtgccttagaaaatacaaaaaaagcaagattttatattttagatgaaatc
atgttaaaagcaattccagcagtaagagatcatttatctccttatgcaccagttattaca
caaatcactattgatccagaaaagattagtgaagtaattggaccaaaaggtaaaatgatt
aatcgtattattgaagaaacaggcgttaagattgatattgaagacgatggacgtgtcttt
atttgtggttcagatgctgataaagcacaaaaagcaattcaaatgatcgaaggcattgct
aggccaatcgaagaagggcaagaatttgatggtaaggttatgcgtcttatgaattttggt
gcttttgtagaattagtgccaggtaaagaagggcttgttcatatttctcaattagctcat
gaacgtgtagcaaaagtagaagatgtagtagctgttggtgattctattaaagtaaaggta
atcgaaatcgataaacaaggtcgtattaatttatcacacaaggtacttcttccaaagcca
gaaaaggaaaaagaataa
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