Chlorobium limicola: Clim_0553
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Entry
Clim_0553 CDS
T00766
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
cli
Chlorobium limicola
Pathway
cli00020
Citrate cycle (TCA cycle)
cli00480
Glutathione metabolism
cli00720
Carbon fixation pathways in prokaryotes
cli01100
Metabolic pathways
cli01110
Biosynthesis of secondary metabolites
cli01120
Microbial metabolism in diverse environments
cli01200
Carbon metabolism
cli01210
2-Oxocarboxylic acid metabolism
cli01230
Biosynthesis of amino acids
Module
cli_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cli_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
cli_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
cli_M00614
Anoxygenic photosynthesis in green sulfur bacteria
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Clim_0553
09102 Energy metabolism
00720 Carbon fixation pathways in prokaryotes
Clim_0553
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Clim_0553
Enzymes [BR:
cli01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Clim_0553
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GFIT
Motif
Pfam:
IDH
CAMP_factor
MHC_II_beta
Motif
Other DBs
NCBI-ProteinID:
ACD89645
UniProt:
B3EGK8
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All DBs
Position
624283..626508
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AA seq
741 aa
AA seq
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MATTSKIIYTKIDEAPALATYSLLPVIQAFTRGTGVEVETRDISLAGRIIANFPDNLTDD
QKISDQLAELGELALKPEANIIKLPNISASIPQLKAAIAELQDHGYKVPDYPEAPATDAE
KEIQTRYAKVLGSAVNPVLREGNSDRRAPLSVKQFTKKHPHRMGAWSSDSMSHVAHMKDG
DFYGSEKSLTVGAPTSVRIEFVDGSGNVKVLKEKTALLEGEVIDTAVMNVRSLRQFFADQ
IADARESGILLSLHLKATMMKVSDPVMFGHAVTVFFKDVFEKHAAVIKELGVNVNNGLGD
LYAKIRNLPEEQRAGIESDIQAVYPARPALAMVDSDKGITNLHVPNDIIVDASMPVVIRD
SGKMWGPDGKLHDTKAMIPDRCYATMYQAMVEDCQKNGAFDPAVIGTVPNVGLMAQKAEE
YGSHDKTFMAPGNGSIRVVDASGSVLMEQKVEENDIFRMCQVKDAPIRDWVKLAVNRARA
TGSPAVFWLDSNRAHDREIIAKVNEYLKEHDTTGLEICILHPVEAMKFTLERFRAGNDTI
SVTGNVLRDYLTDLFPIIELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFQKEGYL
RWDSLGEFSALAASLEHLAKAFNNSKAQVLADTLDQAIGKFLDNSKSPARKVGQIDNRGS
HFYLALYWAQALAAQSTDQELQARFVEVAGQLAENEEKINAELIGAQGSPVDMGGYYHPN
DELTRKAMRPSATFNAIIDAL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacgtctaaaattatctatacaaagatcgatgaagcgcccgctttggcgacc
tattcccttctgccggttattcaggcattcaccaggggtaccggtgtcgaagtggagaca
agggatatttccctcgccggcaggattattgccaactttccggataatcttactgacgac
cagaaaatttccgatcagcttgccgaacttggcgagcttgccctgaagcctgaagccaac
attatcaagctgcccaatatcagcgcctcgattcctcagctcaaagcagcgatcgcggaa
ctgcaggatcatgggtacaaggtgcccgattaccctgaagctcctgcaaccgatgcagaa
aaagagattcagacccgttatgcgaaagtacttggcagtgccgtgaaccctgtgctgcgt
gaaggcaattccgatcgtcgggcgccgctttcggtgaaacagttcacaaagaagcacccc
cacaggatgggcgcatggagcagcgattccatgtcgcacgttgctcacatgaaagatggc
gatttctacggcagcgagaaatcccttaccgtcggagccccgaccagcgtacgtatcgag
ttcgttgacggcagcggcaacgtcaaggtgctcaaggaaaaaaccgcgctgcttgaaggc
gaagtgatcgataccgccgtgatgaacgttcgctcactgcgacagtttttcgccgatcag
atcgccgatgccagagagtccggcattctcctctcgctgcatctgaaagctaccatgatg
aaagtttccgacccggtcatgttcggtcacgcggttacggtatttttcaaggatgtgttc
gaaaaacatgcggccgtgatcaaggaactcggcgtgaacgtcaataacggacttggtgat
ctgtacgctaaaatccggaatcttccggaagaacagcgtgcagggatcgagtctgacata
caggctgtttatcctgcccgtccggcgcttgccatggtcgattccgacaagggcatcacc
aatctgcatgtgccgaacgatattatcgtggacgcctcgatgccggttgtcattcgtgat
tcaggtaaaatgtggggtccggacggcaagctgcacgacaccaaagccatgattcccgat
cgctgttatgcaaccatgtaccaggcgatggtagaagattgtcagaaaaacggagcattc
gatcctgcagtcatcggcaccgtgcctaatgtcggactgatggcccagaaagccgaagag
tacggttcgcacgacaaaaccttcatggccccgggcaatggctctatccgcgtcgtcgac
gcatccggttccgttctgatggagcagaaggttgaagagaacgatattttcagaatgtgc
caggtcaaggatgcaccgattcgcgactgggtgaaacttgccgtcaaccgtgcgagagcg
accggatctccggccgtattctggctcgacagcaaccgtgcacatgaccgcgagatcatc
gccaaggttaacgagtacctcaaggagcacgatacaaccggccttgagatctgtattctt
catccggtcgaagccatgaagttcactctcgagcggttcagggccggcaacgataccatt
tcggtgacaggcaacgtgcttcgcgactatctgaccgatctgtttccgatcatcgaactt
ggcaccagtgcgaaaatgctctccatcgttccgcttatgaacggaggcgggctttttgaa
accggcgcaggcggttccgctccgaaacacgtgcagcagttccagaaagagggctacctt
cgctgggattctctgggcgagttctcggcacttgccgcatcgctggagcaccttgcaaag
gcattcaataacagcaaagcccaggtgcttgccgatacgctcgaccaggctatcgggaaa
ttcctcgataacagcaaatcgccggctcgcaaggtcggccagatcgacaatcgcggaagc
cacttctatcttgctctttattgggctcaggcgcttgcggcacagagcactgatcaggaa
cttcaggcccgttttgtcgaagttgccggacagcttgccgaaaacgaggagaagatcaac
gcagagctcatcggagcgcagggaagtccggttgatatgggcggctactaccatccgaac
gacgaactgaccagaaaggccatgcgtccgagcgctacgttcaatgcgatcatcgacgca
ctgtaa
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