Campylobacter lari subsp. concheus LMG 11760: CONCH_0796
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Entry
CONCH_0796 CDS
T03557
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03420
Nucleotide excision repair
cll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CONCH_0796 (rep)
03430 Mismatch repair
CONCH_0796 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cll03400
]
CONCH_0796 (rep)
Enzymes [BR:
cll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CONCH_0796 (rep)
DNA repair and recombination proteins [BR:
cll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONCH_0796 (rep)
MMR (mismatch excision repair)
Other MMR factors
CONCH_0796 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
DEAD
Churchill
Motif
Other DBs
NCBI-ProteinID:
AJC89208
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All DBs
Position
753819..755840
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AA seq
673 aa
AA seq
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MPLSRLNEEQYKAASAPFGHNLIIASAGTGKTSTIVARIAFLLQNGIKPEKIMLLTFTNK
ASKEMIERLGRYFDKSITLKITAGTFHSTAYSLLKELNHDIILKPASELKILLRSIFEKR
TFHHLSDTKPYMPSYLYDVYSLFQNTNANLDEFYNWFCQNYDEQAIYAEIYEDILKEYEE
EKARFNYVDFNDLLIKLKHVLASHHFEFDEILVDEYQDTNTLQGSLIDAFKSKSLFCVGD
YDQSIYAFNGADISIIGSFKDRFIDANIFTLNKNYRSSKNILALANKVILNNERLYPKEL
IVTREGDFKAPSLLTFNELFDQYSTIAKIILQSGVNLDEIAVIFRNNSSADGVEVALREL
GIASKRKGGGSFFESLEVKNFCSMLAIVLNPKDIMAFIHLLEYTKGVGGVLAKDIFDALL
KLGHSSLIKGFLNPDSSVSLKKYKKQSYQLGLFDDIEELASPSRFNLESEFNTHPILSLP
KINELCAKNLEKIYLFIKKASECKVSTQLVNLILENDYFKEICDILATKRATNKNSNVDL
NKKSEILEKINAKMFVLKELAKNYSDNYKYYNFLTLGASEMSSGSGVNLLSIHASKGLEF
ELVFVIDLAQGRFPNQKLMSMGGSLEEERRLFYVAVTRAKDTLYLSYAKYDKIKKSNYQP
SCFLIEAGMCKEE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcccttatcgcgtttaaatgaagaacaatacaaagccgctagtgctccttttggacat
aatctaatcatagcaagtgcaggtacaggtaaaacttcaaccatagttgcaagaatagct
tttttacttcaaaatggcataaagcctgaaaaaattatgcttttaacttttacaaacaaa
gctagtaaagaaatgatagaaagacttggtaggtattttgataaaagtattactttaaaa
atcacagcaggaacctttcatagtactgcttattctctacttaaagagttaaatcatgat
attattttaaaacctgctagtgagcttaaaattcttttacgttctatttttgaaaaacgt
acttttcatcatctaagtgatactaaaccttatatgccaagttatttgtatgatgtatat
tctttatttcaaaatactaatgcaaatttagatgaattttataattggttttgtcaaaat
tatgatgaacaagctatttatgctgaaatttatgaggatattttaaaagaatacgaagaa
gaaaaagcacgttttaactatgtagattttaatgatttattgattaaattaaaacatgtt
ttagcttcacatcattttgaatttgatgagattttagtagatgaataccaagatactaat
actttacaaggttcattaattgatgcttttaaaagtaaaagtttattttgtgtgggtgat
tatgatcagagtatctatgcttttaatggggctgatatttctattataggaagttttaaa
gatagatttatcgatgcaaatatttttactttaaataaaaactatcgttctagtaaaaat
atacttgcgctggctaataaagtaattttaaacaatgaaagattataccctaaagaattg
attgtaaccagagaaggagattttaaggcaccaagtttgctaactttcaatgaattattt
gatcaatactccaccatagcaaaaataatcttacaaagtggagttaatcttgatgaaatt
gctgttatttttagaaacaattctagcgcagatggagtagaagttgccttaagagaactt
ggtatagcaagcaaaagaaaaggtggaggaagcttttttgaaagcttggaagttaaaaac
ttttgctctatgcttgcaatcgtgcttaatccaaaagatatcatggcttttatacatttg
cttgaatacaccaaaggagtcggtggggttttagcaaaagatatttttgatgctttatta
aaactggggcattctagcttgattaaaggttttttaaatcctgatagtagtgttagttta
aaaaaatacaaaaaacaaagttaccaactaggactttttgatgatattgaggagctagcc
tcgccttcaaggtttaatttagaaagtgaatttaacacccaccctattttaagccttcct
aaaatcaacgagctttgtgcgaaaaatcttgaaaaaatttatctttttattaaaaaagca
agcgagtgtaaagtttcaactcagcttgtaaatttaatcttagaaaatgattattttaaa
gaaatttgtgatattttagcaaccaaaagagcgactaataaaaactccaatgttgattta
aataaaaaaagtgaaattttagaaaaaatcaatgcaaaaatgtttgtactaaaagaactt
gctaaaaattatagtgataattataaatattataattttcttactcttggtgctagtgaa
atgagtagtggcagtggggttaatcttttaagtatacatgctagtaaggggcttgagttt
gagcttgtatttgtaattgatcttgcacaaggaagatttcctaaccaaaaactcatgagt
atgggtggaagtttagaagaagaaagaaggcttttttatgtagcagtaactagagctaag
gatactttatacttaagctatgcaaaatatgacaagataaaaaaaagcaattatcaacct
tcgtgttttctaatcgaagcaggtatgtgtaaagaggaataa
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