Campylobacter lari RM16712: UPTC16712_0642
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Entry
UPTC16712_0642 CDS
T03556
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00470
D-Amino acid metabolism
clm00550
Peptidoglycan biosynthesis
clm01100
Metabolic pathways
clm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UPTC16712_0642 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UPTC16712_0642 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
UPTC16712_0642 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clm01011
]
UPTC16712_0642 (ddlA)
Enzymes [BR:
clm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
UPTC16712_0642 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
clm01011
]
Precursor biosynthesis
Amino acid ligase
UPTC16712_0642 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AJD06156
LinkDB
All DBs
Position
617101..618141
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AA seq
346 aa
AA seq
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MTYGVIFGANSYEHEISIVSAVVLKKVLKAQKKFIFCDKNKEFFLIDEEKMNAKTFSSGA
YKKEKALVLKQGGFFIKTMLGEKKLDIDIAINIVHGKDGEDGKIAALLDFYGIKYIGPRI
EASVLSFNKVLTKLYAQSVGVKTLDYRVLNLHKEQNVSLDFPCILKPARLGSSIGISIVK
DESELKYAKDVAFEFDEDVVVEQFVSNIKEYNLAGCMIGEKMEFSIIEEPRKNEILDFEQ
KYLGFSESSKVSEANISEELKQKLKDNFTRIYDPLFKGALIRCDFFVIDDEVYLNEINPN
PGSLANYLFEDFTNIINNLAKNIELEKQIKIDYAFIHSINGQKGKL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacatatggtgtaatttttggtgcaaattcttatgagcatgaaattagcattgtgagt
gctgtggtgttaaaaaaagtactcaaagcgcaaaaaaaatttatattttgtgataaaaat
aaggaattttttcttatagatgaagaaaaaatgaatgcaaaaacttttagtagtggcgct
tataaaaaagaaaaagccttagtattaaagcagggtggtttttttataaaaactatgtta
ggtgagaaaaaacttgacattgatatagcgataaatattgtacatggaaaagatggtgaa
gatggcaaaatagctgctttgcttgatttttatggtataaaatacataggaccgcgcata
gaagctagtgttttatcttttaataaggttttaactaaactttatgcgcaaagtgtaggg
gtaaaaacacttgattatagggttttaaatttacataaagagcaaaatgtttctttagat
tttccttgtattttaaagcctgcaagattaggtagtagtataggtataagtatagttaaa
gatgaaagcgagcttaaatatgctaaagatgttgcttttgaatttgatgaggatgttgta
gtagaacaatttgtaagcaatattaaagaatacaacttagcaggttgtatgataggtgaa
aaaatggaattttctatcattgaagagcctagaaaaaatgaaattttagattttgaacaa
aaatatttaggtttttcagaaagttctaaagtgagtgaagcaaatattagcgaagaatta
aaacaaaaactaaaggataattttacgagaatttatgatcctttgtttaaaggagctttg
attcgctgtgatttttttgtgatagatgatgaggtttatttaaatgagattaatccaaat
ccaggatcattggcaaattatttatttgaagattttactaatataattaataatttagca
aaaaatatagagttagaaaagcaaatcaagatcgattatgcttttattcacagcattaat
ggacaaaaaggtaaattgtaa
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