Campylobacter lari RM16712: UPTC16712_1146
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Entry
UPTC16712_1146 CDS
T03556
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
clm
Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clm03032
]
UPTC16712_1146 (gyrA)
03400 DNA repair and recombination proteins [BR:
clm03400
]
UPTC16712_1146 (gyrA)
Enzymes [BR:
clm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UPTC16712_1146 (gyrA)
DNA replication proteins [BR:
clm03032
]
Prokaryotic type
DNA Topoisomerases
UPTC16712_1146 (gyrA)
DNA repair and recombination proteins [BR:
clm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UPTC16712_1146 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJD06650
LinkDB
All DBs
Position
complement(1124546..1127134)
Genome browser
AA seq
862 aa
AA seq
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MENIFTKDSDIENIDIESSIKSSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMNDLGV
GSRSAYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRYPSVDGQGNFGSIDGDGA
AAMRYTEARMTILAEELLRDIEKDTVDFIPNYDDSMSEPDVLPARVPNLLLNGSSGIAVG
MATNIPPHSLNELIDGLLYLIDNKNASLEEIMHFIKGPDFPTGGIIFGKKGIIEAYRTGR
GRVKVRAKTHIEKRSNKDIIVIDELPYQTNKARLIEQIAELAKEKQIEGIAEVRDESDRE
GIRVVIELKRDAMSEIVLNNLFKSTTMESTFGVIMLAIHNKEPKVFSLIELLNLFLNHRK
TVIIRRTIYELQKARARAHILEGLKIALDNIDEVIALIKNSPDNPTAKNLLMEKFGLSEL
QSNAILDMKLGRLTGLEREKIDNELRELLAEIERLDQILKSETLLENLIKDELKEIRTKF
DVPRITQIEDDYDDIDIEDLIPNENMVVTITHRGYIKRVPSKQYEKQKRGGKGKVAVTTY
DDDFIESFFTANTHDTLMFVTDRGQLYWLKVYKIPEGSRTAKGKAVVNLINLQADEKIMA
IIPTTDFDESKSLCFFTKNGIVKRTNLSEYQNIRSVGVKAINLDENDELVTAIIVARDEN
EIANVNASENLEIDENLENESSENSEELDNITSGKMLFAVTKKGMCIKFPLAKVREIGRV
SRGVTAIKFKEKDDEVVGAVVIENDAQEILSVSAKGIGKRTDAGEYRLQSRGGKGVICMK
LTAKTKDLIGIVIVDESMDLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSI
AKCPKEEDEELDAETNMDLNLE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatttttactaaagattcagatattgaaaatatagatatagaaagttctata
aaaagtagttatttagattattctatgagtgttattataggccgtgctttgcctgatgct
agagatgggcttaaacctgttcatagaagaattttatatgctatgaatgatttaggtgtt
ggaagtcgtagtgcttacaaaaaatcagcacgtatagtgggtgatgtaatcggtaaatac
catccacacggtgatacagctgtatatgatgctttagtaagaatggcgcaagatttttct
atgcgttatccaagtgtggatgggcaaggaaactttggttctattgatggtgatggtgct
gctgcgatgcgttatactgaagctaggatgacgattttagctgaagaacttttacgtgat
atagaaaaagacacagttgattttataccaaattatgatgattctatgagtgaacctgat
gttttacctgctagggtgccaaatttactacttaatggttcaagtggtattgcagtaggt
atggctactaatattcctccgcatagtttgaatgagcttattgatggtttgctttattta
attgacaataaaaatgcaagcttagaagaaatcatgcattttatcaaaggccctgatttt
ccaaccggtggtattatctttggtaaaaaaggtattatagaagcttaccgtacaggtcgt
ggtagggtaaaagtaagagcaaaaacccatattgaaaaaagatctaataaagatattatc
gtcatagatgaacttccttatcaaactaacaaagcaagattaatagagcaaattgctgaa
cttgctaaagaaaaacaaatcgaaggtattgctgaagttagagatgagagtgatagagaa
ggaattcgcgtggtgattgaactaaaacgcgatgctatgagtgagattgtgttgaataat
ctttttaaatctaccaccatggaaagtacttttggcgtgattatgcttgctatacataac
aaagaaccaaaagttttttctttaatcgagcttttaaatttgttcttaaatcatagaaaa
actgtaattattagaagaacgatttatgaattgcaaaaagctagagctagggcgcatatt
ttagaaggtttgaaaattgcactagataatatcgatgaagtgatagctttgattaaaaat
tctcctgataatccaacagctaaaaatttattgatggaaaaatttggcttaagcgagctt
caatcaaacgcgattttagatatgaaattaggccgtttaacaggacttgaaagagaaaaa
attgacaatgaattaagagaattattagcagaaattgaaagacttgatcaaattttaaaa
agtgagactttacttgaaaatttaattaaagatgaattaaaagaaattagaaccaaattt
gatgtgccaagaatcacccaaattgaagatgattatgatgatattgatatagaagattta
ataccaaatgaaaacatggtagttactattacccatcgtggttatattaaacgtgttcca
agtaagcaatatgaaaaacaaaaacgtggcggcaaaggtaaggttgcggttacaacttat
gatgatgattttattgaaagcttctttacagcaaatacacatgatactttgatgtttgtt
actgatcgtggacaactttactggcttaaagtttataaaattcctgaaggaagtagaact
gctaaaggtaaagccgtggttaatcttattaatctacaagcagatgaaaaaattatggca
attattccaaccactgactttgatgaaagtaaatcattgtgtttctttacgaaaaatggt
attgtaaaacgcacaaatttaagtgagtatcaaaacattagaagcgtgggtgtaaaggcg
attaatttagatgagaatgatgagctcgttactgcaatcattgtagcaagagatgaaaat
gaaatcgcaaatgtaaatgcaagtgaaaatttagaaatagatgaaaatctagaaaatgaa
agtagtgaaaatagtgaagaattagataatattactagtggtaaaatgcttttcgcggta
actaaaaaaggtatgtgtattaaattcccacttgctaaagttagagagattggtcgtgta
agtagaggggtgactgcgattaaatttaaagaaaaagatgatgaggttgtgggtgctgtt
gttatagaaaatgacgcccaagaaatcttaagcgtaagtgctaaaggcataggcaagcgt
actgatgctggagaatacagacttcaaagcagaggcggtaaaggtgttatctgtatgaaa
cttactgctaaaacaaaagacttaatcggtatagttatagttgatgaaagtatggatttg
atggcattaacaagcagtggtaagatgatacgcgttgatatgcaaagtattagaaaagca
ggtagaaatacaagtggtgtaattgttgttaatgttgaaaacgatgaggttgtaagcatt
gctaaatgtcctaaagaagaagatgaggaattagatgctgaaactaatatggatttaaat
ttagaatag
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