Campylobacter lari RM16701: UPTC16701_0943
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Entry
UPTC16701_0943 CDS
T03550
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clr
Campylobacter lari RM16701
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clr03016
]
UPTC16701_0943 (truA)
Enzymes [BR:
clr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
UPTC16701_0943 (truA)
Transfer RNA biogenesis [BR:
clr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPTC16701_0943 (truA)
Prokaryotic type
UPTC16701_0943 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJD04978
LinkDB
All DBs
Position
complement(923013..923747)
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AA seq
244 aa
AA seq
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MLLKLTFSYDGSKFQGSATQPHKLSVQDALAQALSHLGIYEKPLFASRTDKGVHAFNAVA
CVKAGEHFKDFVYLKNKINHFAHPFIHIKHIQRMQENFQVRFDVQKRAYRYIISHEKYNP
FLASYVHFYPKINIKLAKEIAFLFEGEHDFKLFQKEGSDNKTSIRKMYKTRVYAYKNYTV
FYFEANGFLRSQIRMMMASILKVLEGKMSQNELLEQINTKKAHCRFLAPASGLYLSKISY
YNNA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaaattaactttttcttatgatggttctaaatttcaaggttcagctacccag
ccacataaacttagtgtccaagatgctttagcgcaggctttgtcgcatttgggtatttat
gaaaagcctttatttgcttcaagaactgataaaggtgtgcatgcatttaatgcagttgct
tgtgttaaagcgggagaacattttaaagattttgtatatttaaaaaataaaatcaatcat
tttgcgcacccatttatacatataaagcatatccaaagaatgcaagaaaatttccaagtg
cgttttgatgtgcaaaaaagagcatatcgctatattataagtcatgaaaaatataatcct
tttttagcctcttatgtgcatttttatccaaaaataaatattaaattagccaaggaaatt
gcttttttatttgaaggagagcatgattttaaactctttcaaaaagaaggctctgataat
aaaacaagtataagaaaaatgtataaaactagagtttatgcttataaaaattacactgtg
ttttattttgaagcaaatggttttttaagatctcaaattagaatgatgatggcaagtatt
ttaaaagtattagaaggaaaaatgagccaaaatgagcttttagagcaaatcaacactaaa
aaagctcattgtagatttttagctcctgctagtggtttgtatttgagtaagatttcttat
tataataatgcatga
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