Clavispora lusitaniae ATCC 42720: CLUG_03973
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Entry
CLUG_03973 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03008
Ribosome biogenesis in eukaryotes
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUG_03973
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_03973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_03973
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_03973
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_03973
03016 Transfer RNA biogenesis [BR:
clu03016
]
CLUG_03973
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUG_03973
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
CLUG_03973
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
RNases
CLUG_03973
Transfer RNA biogenesis [BR:
clu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
CLUG_03973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
DUF5385
Motif
Other DBs
NCBI-GeneID:
8496982
NCBI-ProteinID:
XP_002616732
UniProt:
C4Y739
LinkDB
All DBs
AA seq
373 aa
AA seq
DB search
MPLQNKMQKSPSYGFMSMFCVSIWRWSCANVHGCSGTLERAIDDWVFMCFFVGNDFLPHF
PSLSVRDNGIDILVGCWKQVIPRLRDYITCDGKLNYEGVEQLLAVLATKEDEILRKRHES
ERRYANNEKRRKVGQAEEKAMRAQFLPNVSKGRERAPVHADTNMPLMDTSGNLVEGYAQL
SNKDIVHNRDVITKANMANEDAAAALRKLLEAKASGATGKSEETSDVSIKNEEESEFESQ
EPIDSIKGEDVDSVKSESMESLKTESSDSIKQADSAEPPSRKRALDDVRYLEAGYRDRYY
EAKFGASSPEEVADIRKKVVRAYLEGISWVLLYYYQGCPSWQWYFPYHYAPFAADFTNLR
EIVGEEGIKFDFG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccattgcagaacaagatgcaaaaaagcccttcctatggcttcatgtcaatgttttgc
gtgagtatttggaggtggagttgcgccaacgtacacggatgcagtgggactttggagcgc
gccatcgacgactgggtattcatgtgttttttcgttggtaatgattttttgccccacttt
ccctctttgagtgttcgggacaatggtattgatattttggttggatgctggaaacaagta
atcccccgtcttcgtgattacattacatgtgatggaaagttgaattacgaaggtgtcgag
cagttgttggcagttttagctacaaaagaagatgagatacttcgcaagaggcacgagtcc
gaaagaagatatgccaacaacgaaaagaggaggaaggtgggccaagctgaagagaaggct
atgcgtgctcagttcttgcctaatgtctctaaaggacgtgagcgtgcaccggtacacgca
gacacgaatatgcctttgatggatacgctgggaaatttggtagaagggtatgcgcagttg
tccaacaaggatatcgtgcacaaccgtgatgtcattaccaaagcaaacatggcgaacgag
gacgcagctgcggcgctccgcaagttgctagaggcgaaggcaagtggcgcgactgggaaa
tcagaagaaaccagtgacgtcagcattaagaacgaagaggagctggaattcgagctgcaa
gaaccgattgactccattaaaggtgaagatgtggattctgttaaaagtgaatccatggaa
tcccttaaaacggagtcttcagactctattaagcaggcagactccgcagaaccaccatct
cgcaaacgtgccctagatgacgtgcgttatcttgaagcgggatacagagaccgttactat
gaggctaagttcggcgcttcttcgccagaagaggttgccgacattcgtaaaaaagttgtc
cgcgcctacttggaaggtatttcatgggtgttattgtattactaccaagggtgtccctcg
tggcaatggtattttccttaccactacgccccctttgctgcagatttcaccaatctacgt
gaaatcgtgggcgaggaaggaatcaaattcgattttgggtga
DBGET
integrated database retrieval system
