Canis lupus dingo (dingo): 112651380
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Entry
112651380 CDS
T08371
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112651380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112651380
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112651380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112651380
NCBI-ProteinID:
XP_025290363
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Position
4:21275189..21355608
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AA seq
597 aa
AA seq
DB search
MPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGE
MGLTGPRGQPGPPGQKGEKGQCGEYPHREHLSSTLSALRSNQIITLKGEQGQAGIQGPPG
PPGPPGPSGPLGYPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKQGAKG
APGIAVAGMKGEPGTPGAKGEKGAAGPPGLLGLLGQKGEKGDAGNSIGGSRGEPGPPGLP
GPPGPKGEAGVDGQAGPPGQQGDKGEPGAAGEQGPAGPKGTKGEPGKGEMVDYNGNINEA
LQEIRTLALMGPPGLPGQIGPPGVPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGP
QGPPGKSGPAGMKGEDGHTGSPGEKGEKGETGQAGAPGLDGPTGEKGEPGGQGRPGATGL
PGPIGLPGFTGEKGEPGEKGEPGLEVPGPPGPEGPPGPQGLQGVPGPKGEAGLDGAKGEK
GAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDLGMTGPTGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggggccccaggagatgcc
ggcatgtccatcatcggcccccgcggcccccctggtcagccgggcactcgaggttttcct
ggatttccgggtcccattgggctagacggcaaaccgggccaccccggacccaaaggggag
atgggcctgacgggtccccgaggacagccgggacctccaggacaaaaaggagaaaagggg
cagtgtggagagtacccacatcgggagcacctgagcagcaccctttcggctctgcgctcc
aaccagatcattaccctgaagggtgaacagggccaggccggtatccaaggcccaccaggg
ccaccaggcccccctggaccaagcggacctctggggtacccgggactgccagggcccatg
gggccacccggcttacccgggcctcctggaccaaagggagacccaggaatccaaggctac
cacggccggaagggagaacgaggcatgccagggatgccgggcaaacaaggagcgaaggga
gctcctggaattgctgtggccgggatgaagggtgagccagggaccccaggagccaagggc
gagaagggggctgcaggcccccccgggctactcggcctcctggggcagaagggagaaaaa
ggtgatgctggcaactccattggaggaagcagaggggagccgggccccccagggctcccg
gggcccccaggcccaaagggagaagctggtgttgatggccaggccggccccccaggacag
caaggagacaagggggagcccggagcagctggagaacagggaccagctggccccaagggc
accaagggggagccagggaaaggagagatggtggactacaacgggaacatcaatgaggcc
ctccaggagatacgaacgctggccttgatggggccccctggtcttcccgggcaaatcggc
ccacccggagtcccagggatcccaggccagaagggcgagatcggactcccaggccctcca
ggacacgatggggaaaagggacctcgaggcaaaccaggagacatgggcccccccggcccc
caaggccccccaggaaagtctggaccggcaggaatgaagggagaagacggacacacaggg
agcccaggagagaagggggagaaaggggagacgggacaggcaggcgcaccgggtctagac
ggcccaactggggagaaaggagaaccaggtggccaagggagacccggagcaacaggattg
cccggccctatcgggctcccgggatttacaggagagaaaggagagcccggggagaagggt
gagccaggactggaggttcctgggcctccagggccagaggggccccccggaccccagggg
ctccaaggtgttcctggaccaaagggggaagcaggacttgatggagcaaaaggagagaag
ggtgcccagggagagaaaggagatcgggggccactgggattacccggagcttcaggtttg
gacggcaggcctgggccaccgggtactccaggaccaatcggagttccaggcccagcagga
ccaaagggcgagaggggcagcaaaggtgaccttgggatgacaggaccaacaggagcagct
gggcttcctggtttacacggaccacccggggacaaaggaaaccggggggagagggggaag
aaaggctctagagggcccaaaggggataagggagaccaaggagcgcctggattagatgcc
ccctgcccgttgggtgaagacggcttaccggtccagggctgttggaacaagtga
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