Cyclopterus lumpus (lumpfish): 117729705
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Entry
117729705 CDS
T09199
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117729705 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117729705 (efcab7)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
EVC complex
117729705 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
EF-hand_4
SPARC_Ca_bdg
EF_assoc_2
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
117729705
NCBI-ProteinID:
XP_034386912
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Position
4:11786613..11797708
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AA seq
629 aa
AA seq
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MSFPESPRPSEEEEAFYVQCRAAYLAVFKSSLTNIASKQQLCRALQQAGRNPAHATLNKY
WTPRTSKLNFDDFCEILKNEKKTEESELMRAFKKMDLNSDGFVSHSELEKALTTRGEKMT
TEEVNAIFSLADINKDGKLDYAEFCRLLVSTVEQCQVAALERLEANAKLKRQNFGSRSYS
PPKSSVSSASSSSSAAAAAAQAAATLPQPPETLRAESDTTLKKDSRSSSRPSSARSRRSS
LSNSITMTSSSSKASKIPEPSGLQEWHHSYMKGCFFLEDDGSISCLQYQLHVPQTTNVYL
TIRPLSLSHGPDKPSSWMTVDTALFAMAAGETKEDSTLVGFTESKDKEKYVWKGELHAGT
YYLLPFSSGCKLKKRSKKSPSNRPIELVYRTDSGELDLTRELREVLSDIFEVIDLDGNGL
LSLEEYNFFELRTSGEKCDKDAWAVCKENFDMRKNQLTQQGFMELNLMEATEKDGDPADL
WVILEAMGFNHMLELVDACPFRIDVHCEGTQPSIQPLSMDSGPKLQNQALQKSITARTGA
KALRGQDNVFIYTYRGEHRISSLIANKSNQKVTVHVNNEQSRNCCSSRGMSVFAVEVPGR
TKMVCQHILPINERQDWTYNCVETILPCA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccagagtcccctcgtccttctgaggaagaggaggctttctacgtgcagtgt
cgagccgcgtacctcgctgtgttcaagtctagtttgaccaatattgcttcgaaacagcag
ctgtgtcgtgctctacagcaggctggtagaaatccagcccatgcaactcttaataaatac
tggaccccgagaacatccaaactgaactttgatgacttctgtgagattcttaaaaatgag
aagaaaactgaggaaagtgagctaatgagagccttcaaaaagatggatttgaacagtgat
ggcttcgtctcacacagtgaactggagaaggcccttaccactagaggagagaaaatgacc
actgaagaggtgaatgctattttttcattggctgacatcaacaaagacggcaaactggac
tatgcagaattctgcagattgctcgtgtctacagtagagcagtgtcaggtggctgcttta
gagaggctcgaggcaaatgccaagctgaagagacagaactttggcagtcggtcatacagc
ccaccgaagagctcagtgtcatcagcatcatcgtcatcatcagcagcagcagcagcagca
caagcggcagcgactctccctcaacctccagaaacactccgggcagaatcagacaccaca
ctcaagaaagacagcagatcatcctcccgtccttcttctgctcgcagcagacggtcgtca
ctgtcaaactcaatcacgatgacatccagcagctctaaggccagcaagataccagagcct
tcaggcttacaggagtggcatcacagttatatgaagggctgtttcttcttggaggatgat
gggagtatcagctgtctgcagtaccagctccacgttccccagacgaccaacgtctacctg
accatccgaccactcagcctcagccacggacccgacaagccttcttcgtggatgacagtg
gacacggctctttttgcaatggcagctggtgaaaccaaagaggactcaactttagtgggt
ttcactgagtcaaaggacaaagaaaaatatgtttggaaaggagaactgcatgctgggact
tattacctgcttcccttcagcagtggatgcaaactaaagaaaaggagcaaaaagagcccg
tctaatagacctatagagctcgtctacaggactgactctggagaactagacctcaccaga
gagctcagggaggtgctgtcggacatctttgaggtgatagacctggatggcaatggtttg
ctcagcctggaggagtacaatttctttgagctgaggaccagtggagagaaatgtgacaaa
gatgcctgggctgtctgcaaagagaactttgatatgaggaagaaccagctgacacagcag
ggcttcatggagctcaacctgatggaggccacagagaaagatggagaccctgcagacttg
tgggtcatcttggaagccatgggcttcaaccacatgctggagctagtagatgcttgtcca
ttccggatagatgtacactgtgaaggcactcagccatccatccagccactcagtatggac
tcagggcccaagcttcagaaccaggctctccagaagtccatcacagccaggacaggggcc
aaagcactgagaggacaagacaacgtcttcatctacacctaccgaggagaacacaggatc
tcctccctcatagccaacaagagcaaccagaaagtcaccgtccatgtgaacaatgagcag
agcaggaactgctgcagcagcagaggcatgagcgtgttcgcagtcgaggtgccaggaagg
acaaagatggtgtgccaacacattctgcccatcaatgagagacaggattggacctacaac
tgtgttgagaccatactgccctgcgcgtaa
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