Clavispora lusitaniae CBS 6936: A9F13_14g00715
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Entry
A9F13_14g00715 CDS
T05147
Name
(GenBank) putative DdNA mismatch repair protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A9F13_14g00715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_14g00715
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
A9F13_14g00715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
OVF07239
UniProt:
A0AA91PX63
LinkDB
All DBs
AA seq
1002 aa
AA seq
DB search
MSGSSKRQKSISSFFTPVKTKVTPSPNPSADADTPTKDNAIKRKLEHFTHSNNTSPIVPK
KARTIPSKKPSENAKRPVSSTAKSKLTPLEKQFIDLKSDHGDKILAIQVGYKFKFFGNDA
VTASKLLNIMLLPGNLELDERTHDRFAYCSIPDNRLHVHLQRLLNHGLKVGVVKQTETAA
IKSVESSNKSGLFERKLTGVYTKATYMGDELLTGDPTISRSNNVADSLDGETYVLCVNES
NFSKQTSLVAVQPLTGDIVFDVFSDTQSRDELETRLMYFNPSEVIVITEDEKISPETSKV
LKLKNSAMAITQKIQRSETEIKSDMHEFFSSVDPDGHNAYLTEHYTLNYPLGIQACIIEL
IDYLSEFKLSNIFTIPSNFSSLTDAHMYMVLPASTLKALDIFEVNEDPTTKKGTLLWLLD
NTFTRKGSRTLRKWINRPLVKREEIEQRAKAVDVLKSGAFVHILDAFKQAVMKIGKSGVD
LDRSLIKIHYSATYKSNKITRKDLYNMLRSFHDILELFRSFGAKGIEEFKSVHDCPLLIS
ILEDMLCLSENHTVDELLKSINPSGALSDQNLSEQKIKFFDLSQDKFHKISKELDEIARV
ERKLDDELQNIRKVLKRPQLSFITNFKETHLIEVRNGKNVDALPSDWVKISGTKTVSRFR
TPEVTKLHKELQYHNDMLLMACDECFNFFLSEVDSEYIYLRRIVDNLATFDCLLSLARSA
ADVGDVTFITPKLVDEQVMSVKNSVHPILLNLPQNNGQYVPNDIKLSTDDNRVLIITGPN
MGGKSSYVKQIALLAIMTQIGCLLPCSSATMGIFDSIFIRMGASDNILRGKSTFLVEMLE
SANIIQNYTPKSLVILDEIGRGTGTSDGISLAYAILRYIIEDKKKPLTLFITHFPSLSTL
ETEFNDVKNFHMAFVEKKRNEGKESEWPEVIFLYKLVSGVVSNSYGLNVAKLAGIDDSII
QSAYNVSESMKRLIEKRSLLQLLSQMTSDNAAQILKEASSIV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcttccaagaggcagaaatccattagtagttttttcacccctgtcaaaaca
aaagtaaccccttctcctaatccaagtgctgatgcagacactccaaccaaagacaatgcc
ataaaacggaaacttgagcattttactcactcgaacaatacatcacccattgtgcccaag
aaagcacgaacaattccgctgaaaaagccttcggagaatgcaaagagaccggtttcaagc
acagcgaaatccaagttaaccccactcgagaaacagttcattgatcttaagctggatcat
ggcgacaaaatcttggccatccaagtcggctacaaattcaagttctttggaaacgacgcc
gtaacagcatccaagcttctaaacatcatgcttcttcccgggaacctagaattggatgaa
cgaacgcatgatcggttcgcgtactgttcgattccagacaatcgtctccatgttcatctc
caacgtttattgaaccatggattgaaagttggtgttgtcaaacagacagagacagctgcc
atcaaatctgtggagagctcaaataaatcgggtttgtttgagagaaaactcactggagtt
tatacaaaggcaacatatatgggcgatgaacttctaactggcgaccctacaatcagcaga
agcaacaatgtggccgattccttggacggagaaacatatgttttatgcgtaaatgagctg
aacttctcgaagcaaacctcgcttgttgctgttcagcctctaactggagatattgttttt
gatgtattctctgatactcaatctcgagacgagctagaaacgagactcatgtacttcaat
cccagcgaggtaatcgttatcacggaagatgaaaaaatctccccggaaacatctaaagtc
cttaagctcaaaaatagcgccatggcaataactcaaaaaatccaaagaagtgaaactgaa
attaaaagcgatatgcacgaatttttctcttcagtggatccggacggacacaatgcttac
ttgacagaacattataccttgaattaccctttgggtattcaagcgtgcattatcgaattg
atagactatctttctgagttcaagctcagcaacatattcacgataccttccaacttcagt
agtctcactgatgctcatatgtacatggttttgccagcctccacattaaaagcgcttgac
atttttgaagttaatgaagatccaacaactaaaaaagggaccctactctggcttctagac
aatactttcacaaggaaaggttctcgtacattgcgcaaatggatcaatagaccgctcgtg
aaaagagaagaaatcgaacaaagagccaaagctgtggatgtgttaaaaagtggtgcattt
gtacatatattagatgcattcaagcaagcagtaatgaaaattgggaagtcaggcgttgat
ttggatcgtctgctcattaagattcattattccgcaacttacaagtcaaataagattacg
aggaaagacttgtataacatgcttcgttcatttcacgacattttagaacttttcagaagc
tttggcgctaaaggaatagaagagtttaaatctgttcatgactgccctctattgatctcg
atactagaggatatgctttgtctcagtgagaaccacacagtcgatgaacttctaaaactg
attaatcctagtggagcattaagtgatcagaatcttagtgaacaaaagataaagtttttt
gacctcagccaggataaattccataaaatctcgaaggagctagatgagattgcccgagtc
gaacgtaagttggatgatgaattacagaatataagaaaagtgttgaagcgacctcagctt
tctttcatcacaaactttaaggaaacacacttgattgaagttagaaatggcaaaaatgtg
gatgctcttccttccgactgggtgaaaataagcggtacgaaaactgtttctcgattcagg
acacctgaagttacgaaattgcacaaggaacttcaataccataatgatatgttgttaatg
gcgtgtgatgaatgttttaatttctttctcagcgaagttgattcagaatatatttatctt
cgccgaattgttgataacctagcaacatttgactgtttactttctttagctagatcagca
gcagacgttggagatgtcacattcatcacacctaaattggttgatgaacaagtaatgtct
gtgaaaaacagcgtccacccaattctccttaatttgcctcaaaacaatggacaatatgtt
ccaaacgacattaaattatctacagacgataaccgggtgttgatcataactggacctaac
atgggtggtaaatcctcatatgtgaaacaaattgcattattggcgatcatgacacaaata
ggctgtcttcttccgtgttctagcgcaactatgggtatcttcgactcaattttcattcga
atgggagcttctgataacattcttcgcggtaaatcaactttcttggtcgaaatgttggag
tctgctaatattatccaaaattatacacctaaatctttggttatcctagatgaaattgga
agaggaacagggacgagtgatggaatttccttggcttatgctatactcagatatattatc
gaagataagaaaaagccattaactctattcattacacattttccctctctcagtacattg
gaaacagaattcaacgacgtcaaaaatttccacatggcatttgttgaaaagaaaagaaac
gagggaaaggaatctgaatggcccgaagtgatttttctttacaaactagtgagcggggtt
gtttcgaacctgtatggcctaaacgtcgccaaattggccggtattgacgattccataatt
caaagcgcttacaatgtttctgagtcgatgaaaaggttaattgaaaagagatccctccta
cagcttttgtcccaaatgacttccgataatgctgcgcagatcttgaaagaggcactgtcg
atcgtatag
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