Columba livia (rock pigeon): 102087720 Help Entry 102087720         CDS       T02912                                  Symbol COL5A2 Name (RefSeq) collagen alpha-2(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism clv  Columba livia (rock pigeon) Pathway clv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:clv00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     102087720 (COL5A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:clv00536]     102087720 (COL5A2) Glycosaminoglycan binding proteins [BR:clv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102087720 (COL5A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Amnionless Motif Other DBs NCBI-GeneID:  102087720 NCBI-ProteinID:  XP_005513139 UniProt:  A0A2I0MIG7 LinkDB All DBs Position Unknown AA seq 1495 aa AA seqDB search MMAVWVQTRTFFILAALLGRFVTIKAQEDEYDGGEDVEEIACTQNGQVYLNRDIWKPSAC QICVCDNGAILCDEIQCQDVLECENPQVPPGECCPVCPHTTRDFDPAIGRGRKGQKGEPG IVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGHP THPGPDGLSRPFAAQMAGLDEKSGLGSHMGLMPGAVGPVGPRGPQGLQGKQGGAGPTGPP GEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGLK GHRGLKGLDGPKGEIGAAGAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQH GMPGKPGPMGPLGITGSPGFPGAPGVKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGLP GAEGTDGSPGAKGPTGSPGTEGPLGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEA GPKGEPGPQGPQGPIGPVGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGPK GAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRP GPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPP GLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGER GEPGASGLPGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGDR GGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGEN GPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPPGVPGLKGGR GTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGAHGRVGDRGPA GPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKQ GPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGLP GSPGGPGTPGPVGPPGDAGQRGETGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDR GQKGHRGFTGLQGLPGPPGPIGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPIGPP GVRGSVGEAGPEGPPGDPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAPD DHNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQGC VEDAIKVYCNMETGETCISANPSTIPRKTWWASRSSDVKPIWYGLDMNRGSQFVYGDTAV TQMTFLRLLSKEASQNITYLCKNSVGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRYT VLHDSCSKRNGNVGKTVFEYRTQNVARLPIIDIAPVDIGGMDQEFGMEIGPVCFV NT seq 4488 nt NT seq  +upstreamnt  +downstreamnt atgatggcagtctgggtacaaacgagaactttcttcatccttgctgctttattagggcga tttgtaaccataaaagcgcaagaagatgaatatgacggtggagaagatgttgaagaaata gcctgcactcagaatggccaggtgtacctgaacagggatatctggaagccctcagcatgc caaatctgcgtctgtgacaacggagcgattctttgcgatgaaatccagtgtcaagatgtg ctggagtgtgagaacccacaggtgcctccaggagagtgctgtcctgtgtgtccacacaca acacgcgattttgaccccgccattggtagaggaagaaagggacaaaaaggagaacctgga atagtgccacctgtttcaggaatacgaggccgcccaggaccagccggacctccaggctca caaggaccacgaggagaacgaggaccaaagggaagacctggtcctcgtggtcctcaaggg attgatggtgaacctggtatccctggccagcctggtgaccctggtcctccagggcatcca acacacccaggaccagatggactaagcaggccatttgcagctcagatggccggactggat gagaaatctggacttggtagtcacatgggactgatgcctggtgcagtgggtccagtgggt ccaagaggtcctcaaggtctccaaggaaaacaaggtggtgctggccccacaggcccacct ggtgaacctggggatccaggacctatgggaccagttggttctcgtggaccagagggacct ccaggcaaacctggtgaagatggtgaacctggtagaccaggacaatccggtgagcctgga tttccaggatctccagggcctcgaggctttcctggtgctcctggtctcccaggtctcaag ggtcacaggggattgaaaggacttgacggtccaaaaggtgaaattggagcagctggagca aagggagaatctggaccaacaggtgccatgggtccaacaggtcctctgggacctagagga atgccaggagaaaggggtcgaataggaccacagggtgcccctggtggacgtggccagcat ggtatgcctgggaagccagggccaatgggcccacttggcataactggttctccaggtttt ccaggtgctcctggtgtgaagggtgaagctggcccaacaggtcctcgtggtcctgaaggt cctcaaggacaaagaggtgaaacaggtccccagggcccagctggatcacaaggtcttcct ggtgccgaagggacagatggttccccaggtgccaagggcccaactggatctccaggcact gaaggacctcttggcttatcaggtccgcctggttccccaggaccacaaggcagtaccggc ccacctggtattcgaggccaaccgggagatcctggtgtcccaggtttcaagggagaagca ggacccaaaggtgaacctggcccacaaggtccccagggtcctattggccctgtaggtgaa gaagggaaaagaggtcctcgaggtgatccaggctcagtaggtccaccaggtcctgttgga gagcggggtgctcctggtaaccgtggttttccaggctctgatggcttgcctggaccaaag ggtgcccaaggagagcgtggtccagcaggttcttctggtccaaaaggaggtcagggagat cctgggcgtcctggtgaacctggcctcccgggtgcaaggggtctgacaggaaatccaggt gttcaaggccctgaaggaaaacttggccccttgggtgctcctggagaagatggacgtcca ggtccagcaggttccataggaatcagaggtcagccaggcagcatgggccttcctgggcca aagggcagtagtggagatcctggaaaacccggagaagcaggcaatgcaggtgtcccagga cagagaggagcccctggtaaagatggtgaagttggtccttctggtcctgttggcccacca ggtctggcaggagaaagaggagaacaaggccctccaggtcctacgggctttcagggcttg cctgggccaccaggtcctccaggtgagggaggaaagccaggtgatcagggtgttcctgga gatcctggagctgttggtccattgggccccaggggagaacgtggcaatccaggggaaagg ggagaaccaggtgcgtcaggacttccaggggaaaagggcatggctggaggtcatggtcct gatggtccaaagggaagcccaggccctagtgggacacctggtgatccaggcccaccgggt cttcagggtatgcctggagaaagagggattgctggaacgcctggccccaagggcgacaga ggcggcgtaggtgagaaaggtgctgaaggtacagctggtaacgatggggcaagaggtctc cctggtccaataggcccaatgggtccagcaggtcccactggtgaaaagggtgaaccaggt cctcgaggtctagttggccctcctggctcccgtggaaaccctggttcccgaggagaaaat ggcccaactggtgctgttggttttgctggtcctccgggccctgatggtcagccaggtgtg aaaggtgaacctggagaacctggacagaaaggagatgctggatctccaggaccacagggt cttgctgggtctcctggtccaccgggcccaccaggtgttcctggtctaaaaggtggtaga ggaactcagggtccaccaggtgctactggattcccaggatctgctggaagagttgggcct ccaggacctactggagctccagggcctgctgggcctattggtgagccaggaaaagaaggt cccccaggtcttcggggtgatcccggtgctcatggccgcgtgggagatcgagggccagcc ggtccccctggtggtcctggagacaagggtgacccaggggaagacgggcagccgggccca gatggcccccctggtccagcaggaaccactggtcaaagaggtattgttggaatgcccggc cagcgaggggagcgaggcatgccgggcctgccgggtcctgcaggtactccaggaaaacaa ggtcccacggggccacctggtgataaaggtcccccaggacctattggccagtcaggtgcc actggacctgtaggtgaagctggtccagaaggacctgctggcaatgacggtactcctgga cgagatggagctgttggagaacgtggtgatcgtggtgaacctggtcctgcaggcttacca ggttccccagggggtccaggaactccaggtcctgttggccctccaggagatgctggtcaa agaggtgaaactggttcccgaggtccgatgggtccccctggtcgtgcgggaaagagaggt ttgcctggtccacaaggacctcgtggtgacaaaggtgacaacggagatcgaggtgataga ggccagaaaggacacaggggtttcactgggcttcaaggtcttcctggtcctcctggtcct attggtgaacagggcagtcctggcatcccgggcccatttggtcctcggggtcctccaggt ccagttggtccttctggcaaagatggaagtcctggtcctcttggaccaattgggcctcct ggtgttagagggagtgtgggagaagctggacctgagggtccaccaggtgatcctggccct cctggccctccgggacctccaggccatctcactgctgccattggtgacatcatgggacac tatgatgatgctatggcagatccgctacccgagtttactgaagatgaagcagccccagat gaccataataaaacagacccaggagtccatgccacactgaagtcactgagcagccagatt gagactatgcgcagcccagatggttcaaagaaacacccagcacggacttgtgatgatctg aagctgtgccacccatccaagaagagtggtgaatattggattgatcccaaccagggatgt gttgaagatgctataaaagtatattgcaacatggaaactggagagacctgtatttctgca aacccatctactataccacgtaaaacgtggtgggccagcaggtcatctgatgtaaagccc atttggtatggtcttgatatgaacaggggatcacagtttgtgtatggagatacagctgtc actcagatgacattcctgcgcctcctatcaaaggaagcttcccagaatatcacttatctt tgtaaaaacagtgttgggtacatggatgaccagactaagaacctgaaaaaagctgtaatt ctaaaaggagccaatgacctggagatcaaagcggagggaaacagccggttcagatacacg gttctacatgacagctgttctaaacgtaatgggaatgtgggcaagactgtctttgagtac agaacacagaacgtggcacgcttacctatcatagatattgcaccagtggacattggcggt atggaccaggaatttggaatggaaattgggccagtttgctttgtgtaa

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