Pacificitalea manganoxidans: CBW24_00030
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Entry
CBW24_00030 CDS
T05128
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmag03032
]
CBW24_00030
03400 DNA repair and recombination proteins [BR:
cmag03400
]
CBW24_00030
Enzymes [BR:
cmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBW24_00030
DNA replication proteins [BR:
cmag03032
]
Prokaryotic type
DNA Topoisomerases
CBW24_00030
DNA repair and recombination proteins [BR:
cmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBW24_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Tox-PL-2
Motif
Other DBs
NCBI-ProteinID:
ATI40558
UniProt:
A0A291LVP6
LinkDB
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Position
5281..7698
Genome browser
AA seq
805 aa
AA seq
DB search
MSETPQTPEEYGADSIKVLRGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVTVTVHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHHARFERGETVKHLEVMGDANGRKGTEVRFLGST
DTFSNLDYHFDTLEKRLRELAFLNSGVRIILRDERPTEPLQTELYYEGGVREFVRYLDRS
KSGMIPDPIFMTGERDGISVEVAMWWNDSYHENVLPFTNNIPQRDGGTHMAGFRGALTRT
INNYAQSSGIAKKEKISFTGDDAREGLTCVLSVKVPDPKFSSQTKEKLVSSEVRPAVEGL
VNEKLAEWFEEHPGEARQIVSKIVEAAQAREAARKARELTRRKSAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRGTQAILPLRGKILNVERARFDRMLNSQEIGNLVM
ALGTGIGRDEFDIKKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVARGKSEVYLKDQSALEDYLIQQGADGAALRLSTGEEIVSQDLVRVIEEARQVRGA
ISTFPTHYPTHILEQAAIAGAFVEGAVERDLQGVATTVAERLDLIALEYERGWTGRQTQD
KGMRLTRAVRGVDEVRTLDGPILRGAEARRLGGFTNSLREVYAEPATLIRKDKVLPIHGP
LELLDAVLTEGEKGLSLQRYKGLGEMNPGQLWETTLDPDARTLLQVRIEDVAEADDIFTK
LMGDVVEPRRDFIQSNALNVENLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaccccccagacgccggaggaatacggcgccgattccatcaaagttctcaga
ggcctagaagcggttcgcaagcgcccgggcatgtatatcggcgacaccgatgacggctcc
ggtctgcatcatatggtctacgaggtcgtggataacggcatcgacgaagcgctggcgggt
catgccgatgcggtgaccgtcaccgtgcacgcggattccagcgtatcggtcagcgacaac
ggccggggcattcccgtgggcatccacgaggaagagggcgtttccgcggccgaggtcatc
atgacccagctgcatgcgggcggcaaattcgaccagaactcctataaggtttcgggcggt
ctgcacggcgtgggcgtgtcggtggtcaacgcgctcagcgattggctggagctgcggatc
tggcgcgacggcaaggaacatcacgcccggttcgaacggggcgagacggtcaaacatctg
gaggtcatgggcgacgcgaacgggcgcaagggcaccgaggtgcggttccttgggtcgacg
gatacgttctcgaacctcgattaccacttcgacacgctggaaaagcgtctgcgcgaactg
gccttcctcaacagtggcgtgcgcatcatcctgcgggacgagcgcccgacggagccgttg
cagaccgaactctactacgagggcggcgtccgcgaattcgtgcgctatctcgaccggtcg
aaatccgggatgatccccgatccgatctttatgaccggggaacgcgacgggatctccgtc
gaagtcgcgatgtggtggaacgacagctaccatgaaaatgtgctgccctttaccaacaac
atcccgcagcgcgacggcggcacgcatatggcgggcttccgtggcgcgctgacgcggacg
atcaacaactacgcgcaatcctctggcatcgccaagaaggaaaagatctcctttaccggc
gacgacgcccgcgaagggctgacctgcgttttgtcggtaaaagtgcccgatccgaaattc
tcgtcccagaccaaggagaagctcgtttcctccgaagtgcggcctgcggtcgaggggctg
gtcaacgaaaagctggcggaatggttcgaagagcatcccggcgaggcgcggcagatcgtc
agcaagatcgtcgaggccgcgcaggcccgcgaagccgcccgcaaggcgcgcgaactgacc
cgccgcaaatccgcgatggatgtgaacttcctcgccggcaagctcaaggactgttccgag
aaagacccctcgaagaccgaagtcttccttgtcgagggggacagcgccggcggctccgcg
cagaccgggcgggatcgtggcacacaggccatcctgcccctgcgcggcaagatcctgaac
gtcgagcgggcgcgctttgaccggatgctgaactcgcaggagatcggcaaccttgtgatg
gcgcttggcactggcattggccgcgacgagttcgacatcaagaagctgcgctaccacaag
atcgtcatcatgaccgatgccgacgtggacggcgcgcatatccgcacgctgttgctgacc
ttcttcttccgtcagatgccggaactgatcgaaggcgggtatctctacatcgcgcagccg
ccgctttacaaagtcgcgcgcggcaagtccgaggtctatctgaaggaccagtccgctctg
gaggattacctgatccagcagggcgccgatggggctgcgctacgtctcagcaccggcgag
gagatcgtcagtcaggatctggtgcgggtgatcgaagaggcccgtcaggtgcgcggcgcg
atcagcacattcccgacccattatccgacccatattctggagcaggccgcgattgccggt
gcctttgtcgagggcgcggtggagcgggatctgcagggcgtggccaccaccgtggcggaa
cgtctggacctaatcgcgctggaatacgaacgcggctggacgggccgccagacgcaggac
aagggcatgcgcctgacccgtgcggtgcgcggtgtcgacgaggtgcgcacgctcgacggt
cccatcctgcgcggcgccgaggcccgtcgattgggcggcttcaccaacagcctccgcgaa
gtctatgctgagcccgccaccctgatccgcaaggataaggtgctgccaattcacggcccg
ctggaactgctcgacgcggttctgacggagggtgagaagggtctgagcctccagcgctac
aagggtctgggcgagatgaatcccggtcagctgtgggaaaccaccctcgaccccgacgcg
cgcacgctgctgcaggtccgcatcgaggacgtggcggaggccgacgatatctttaccaag
ctcatgggcgacgtcgtcgaaccgcgccgggacttcatccagtccaacgcgctgaacgtc
gagaatctggacgtctga
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