Pacificitalea manganoxidans: CBW24_12955
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Entry
CBW24_12955 CDS
T05128
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
cmag
Pacificitalea manganoxidans
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmag03009
]
CBW24_12955
03016 Transfer RNA biogenesis [BR:
cmag03016
]
CBW24_12955
Enzymes [BR:
cmag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CBW24_12955
5.4.99.29 23S rRNA pseudouridine746 synthase
CBW24_12955
Ribosome biogenesis [BR:
cmag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CBW24_12955
Transfer RNA biogenesis [BR:
cmag03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CBW24_12955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ATI43460
UniProt:
A0A291M3H3
LinkDB
All DBs
Position
2851366..2852013
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AA seq
215 aa
AA seq
DB search
MDDHYAPPDTPLTLIHTDHQILLVDKPSGLLSVPGKGPHLADCLLSRVQAAFPEALLVHR
LDRDTSGVMVFAMTPHAQRHLGLQFEKRQMKKTYIARLAGELAEKTGTVDLPLIVDWPNR
PLQKVDFETGKPAQTDWRVLKARDGETRVRLTPLTGRSHQLRVHMREIGHPILGDPFYAT
GPARDAPRLMLHAESLRLRHPDGGRTMTFKAPVPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccactacgccccgcccgacacgccacttaccctgatccatacggaccatcag
atcctgctggtggacaagccgtccgggttgctttccgtgcccggcaaggggccgcatctt
gccgattgcctgctgagccgggtgcaggccgcgttccccgaggcgctgctcgtgcatcgg
ctcgaccgcgacacatcgggggtgatggtgttcgccatgacgccgcatgcgcagcggcat
ctggggctacagttcgaaaagcgccagatgaagaaaacctatatcgcgcggcttgctggc
gaattggcggagaagaccggaacggtcgatttgccgctgatcgtcgactggccgaaccgc
ccgctgcaaaaggtcgatttcgagacgggaaaaccggcgcaaaccgactggcgggtgctg
aaagcccgcgatggtgagacccgcgtgcggctgacgccattgaccggacggtcgcatcag
ttgcgggttcatatgcgcgagatcggccacccgattctgggcgatccgttctatgccacc
ggccccgcccgcgatgcgccgcgcctaatgttgcatgcagaaagcctgcgcctgcgtcat
cccgatggcggtcggaccatgaccttcaaggcgcctgtgccgttctga
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