Cobetia marina: BFX80_10715
Help
Entry
BFX80_10715 CDS
T04789
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cmai
Cobetia marina
Pathway
cmai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BFX80_10715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmai02000
]
BFX80_10715
Transporters [BR:
cmai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BFX80_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AOM03051
LinkDB
All DBs
Position
2615188..2616393
Genome browser
AA seq
401 aa
AA seq
DB search
MTKPNAPYVSRGPVTLRVLGTSVTLLESIRQQAHEDLGIRLQFDIMDGVAAQRAGVMAPD
SFDIYDQWFHNVDFVWPANAIQPIELDRIPHWDQINDLPKTGRLTPHAPLGAGGNPVDRL
YVQPDGNCGSRPSDRITMLPVSHNVDSFGYRMDLLPKGLNRDMESWAWLLDERWRGMVSL
QNDSAIGAIDAALAAKAAGLVQFEDLGNLSVNEIDTLIDCLIELKRQQHFRTFWSNQDQA
SSDMVRGRVGIESLWSPAMTMLKQRQIKVRMASPKEGYRAWYGGMSLSRSVKGRTLDAAY
EYLNWWISGWPGAVMARQGYYISTPELTRPYLSEAEWDYWYAGKPASEELADSSGVSGLI
HLGEIRDGGDYLTRMSRIAVWNTVMDEHNYLVRRWNDFMSA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacccaatgccccctatgtgtcacgcggccctgtcactcttcgtgtgcttggc
acctctgtaacgctattggagagcattcgccagcaagctcacgaagatctcggcattcgc
ctgcaattcgacatcatggatggggtagcggctcaacgagcaggcgtgatggcaccggac
agcttcgatatttatgaccagtggtttcataacgtggatttcgtctggccggccaatgcc
atccagccaatcgagctggatcgtatcccgcactgggaccagatcaacgatttacccaag
accggcaggctgacaccgcatgccccactgggagcagggggcaacccggttgatcgcctc
tatgtacagccggatggaaactgcggctctcgtccaagtgatcgcatcaccatgctaccg
gtcagccataacgtcgacagcttcggctatcgcatggacttgttgcccaaaggactgaat
cgcgacatggagagctgggcctggctactggacgaacgttggcgtggcatggtcagtctg
cagaacgatagcgccattggagcgatcgacgccgccttggccgccaaggcggctggcctc
gtacaattcgaagatctgggcaatctcagcgtgaacgagatagataccctgatcgactgt
ctgatcgagctcaaacgtcagcagcacttccgcactttctggagcaatcaagatcaggcc
tcttcagacatggtccgtggccgagtcgggatcgaaagtctctggtctccagccatgaca
atgctcaagcaacgtcaaataaaggtgcgcatggcatcgcccaaagaaggctatcgcgcc
tggtacggtggcatgtccttatcgcgaagcgtcaagggtcggactctggatgcggcctac
gaatatctcaactggtggatttctggatggcccggcgccgtcatggcgcgtcagggttac
tacatctcgacgccagaactgacgcgcccctacctgtcagaagcagagtgggattattgg
tatgccggtaaacccgcatcagaggaacttgccgactcctctggcgtatcgggactgata
catcttggagaaatacgtgatggtggagactatctgacacgcatgagccggatagcggta
tggaataccgtcatggatgaacacaattatctcgtcagacgctggaacgacttcatgtca
gcataa
DBGET
integrated database retrieval system
