Celeribacter marinus: IMCC12053_2344
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Entry
IMCC12053_2344 CDS
T04098
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cmar
Celeribacter marinus
Pathway
cmar03030
DNA replication
cmar03430
Mismatch repair
cmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC12053_2344
03430 Mismatch repair
IMCC12053_2344
03440 Homologous recombination
IMCC12053_2344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmar03032
]
IMCC12053_2344
03400 DNA repair and recombination proteins [BR:
cmar03400
]
IMCC12053_2344
Enzymes [BR:
cmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC12053_2344
DNA replication proteins [BR:
cmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC12053_2344
DNA repair and recombination proteins [BR:
cmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC12053_2344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
AAA_22
nSTAND3
NTPase_1
AAA_14
AAA_5
AAA_29
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ALI56291
UniProt:
A0A0N9ZI14
LinkDB
All DBs
Position
2288353..2289513
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AA seq
386 aa
AA seq
DB search
MRAPVGDMELPPEADRTAGAPHPRETLHLFGQTAAETDFLDAFNADRLHHAWLITGPKGV
GKATLAWRIARFLLDRPIDAGHDGGMFGDAIARPNADTLQIGYDTPVYRRSAQLAEPRLC
LVRRAWDAKKGKHAAQISVDEVRKLNSFFHMSAADGGRRVVIVDAADELNVSAANALLKT
LEEPPKDAFLLLVSHQPSRLLPTIRSRCRELRLGPLDPENLAQALDAAGFDAADRTDALA
ELAGGSVGEALRLTNQDGIETYAELIALFSKMPQFERPRALKLAESCVGAANVARYDLVV
GLMDKFLIRLARSGAGRPPLVEAANGEAALMVRLAPEGQAAKAWAVLQQTLSARAAHAKA
VNLDPAALILDMIFEINDTASRVAAP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgcccgtgggcgacatggaactgcctcccgaggccgaccgcaccgccggcgcg
ccgcatccgcgcgagaccttgcacttgtttggacaaacggcagcagagaccgattttctg
gatgcgttcaacgcggaccgcttgcaccatgcgtggctcatcacgggaccgaagggcgtt
ggcaaagccaccttggcgtggcgcattgcgcggttcttgttggatcgtcccattgatgcg
ggccatgatggcggcatgttcggggacgcgattgcccgaccaaacgccgacacattgcag
atcggttacgacacccccgtatatcggcgctccgcgcaattggccgagccgcgtctgtgc
cttgtgcgccgcgcgtgggacgccaaaaaaggcaaacatgccgcccaaatttcggtcgac
gaagtgcgcaagctgaattcatttttccacatgtccgcagcagacggcggacggcgcgtg
gtgattgtcgatgccgccgacgaactgaacgtttcggcggccaatgcgttgttaaaaacg
ctcgaagagccgccaaaagatgcgtttcttttgctcgtgtcccatcagccctcgcgcttg
ttgcccaccatccgaagccggtgccgcgaattgcgccttggcccacttgatcccgaaaat
ctcgcacaagcccttgacgcggcggggtttgatgccgcagatcgcactgacgcgcttgcc
gaattggcgggcggctcagtgggagaggcgttgcgattgaccaatcaagacgggatagag
acctacgcggaactcatcgcgctgttttccaaaatgccccagttcgagcgcccacgcgcc
ctcaaactcgccgaaagctgtgtcggagcggccaatgtggcgcgctacgatttggtggtt
ggcctcatggataaattcctcattcgcttggcgcgctctggcgcgggacgcccacccctt
gtggaggcggcaaacggcgaggccgcgttgatggtgcgactggcccccgagggccaagcg
gccaaagcatgggcagttttgcaacagaccttatcggcacgcgccgcccacgcaaaggcc
gtcaaccttgaccccgccgcgctgatccttgatatgatattcgagatcaacgacacggcg
tcgcgcgtggccgccccgtag
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