Celeribacter marinus: IMCC12053_877
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Entry
IMCC12053_877 CDS
T04098
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cmar
Celeribacter marinus
Brite
KEGG Orthology (KO) [BR:
cmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmar03021
]
IMCC12053_877
Transcription machinery [BR:
cmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC12053_877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ALI54825
UniProt:
A0A0P0AAA5
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All DBs
Position
complement(890624..891460)
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AA seq
278 aa
AA seq
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MQEIRKFPMLEHEEEYMLAKRWVDHEDSSAAHKLVTSHLRLAAKIAMGYRGYGLPQAEVV
SEANVGLMQAVKRFDPEKGFRLSTYAMWWIRASIQEYILRSWSLVKLGTTSAQKKLFFNL
RKAKSRIGALEVGDMHPDNVARIATDLGVTEDEVISMNRRMAGGDASLNATVGDEDGAAQ
WQDWLEDESANTAADYEAKDELESRRALLAQAMDVLNEREKDILVQRKLQDKPVTLEDLS
SKYDVSRERIRQIEVRAFEKLQDRMKVLAAQEGMSEDA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaattcgcaaatttccgatgctcgagcacgaagaagaatacatgctcgccaaa
cggtgggttgatcacgaggacagttcagcagcccacaaactggtgacatcgcacctacga
ttggccgctaaaatcgctatgggctatcgtggatacggactgccgcaggctgaggtcgtg
tcagaggctaacgtggggctgatgcaggctgttaaacggtttgatcccgaaaagggcttt
cggctgtccacctacgcgatgtggtggatcagggcgtcgattcaggaatatatcttgcgc
tcttggagccttgtgaagcttggcacaacatccgcccaaaagaagctgttctttaatctg
cgcaaggccaagtcacgcattggtgcgcttgaagttggggatatgcaccccgacaacgtg
gcgcgcattgcgactgacttgggtgtgaccgaggacgaagtgatttccatgaaccgccgt
atggcgggtggcgatgcctcgctcaatgccacggtcggtgacgaggatggcgcggcgcaa
tggcaagactggttggaagatgaaagcgccaacacggccgctgattacgaggccaaggac
gaattggaaagccgccgagccctattggcgcaagcgatggacgtgctcaacgagcgtgaa
aaagacatccttgtgcagcgcaaattgcaagacaagcctgtgacgcttgaggatttgtcg
agcaaatatgatgtgtcgcgtgaacgcattcgtcaaatcgaggtgcgtgcatttgaaaag
ttgcaagaccggatgaaggttctcgcagcccaagagggcatgtccgaggacgcctaa
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