KEGG   Cucurbita maxima (winter squash): 111483852
Entry
111483852         CDS       T05246                                 
Name
(RefSeq) histone deacetylase 9-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03082  ATP-dependent chromatin remodeling
cmax03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111483852
   03083 Polycomb repressive complex
    111483852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmax03036]
    111483852
Enzymes [BR:cmax01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111483852
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111483852
   HDAC complexes
    Sin3A-HDAC complex
     111483852
    BRAF-HDAC complex
     111483852
    REST complex
     111483852
    SHIP complex
     111483852
    MiDAC complex
     111483852
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111483852
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111483852
  Chromatin remodeling factors
   NuRD complex
    111483852
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111483852
NCBI-ProteinID: XP_022985969
UniProt: A0A6J1JCR5
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDGSFTRLFRT
IISKVVEMYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHMENLNTKSYISTIK
TQVLENLRFIQHAPGVQMQEVPPDFYIPDIDEDEQNPDERMNRHTQDKQIQRDDEHYEGD
NDNDHDMDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctccaaggataggatttcatacttttatgatggggacgttggaagtgtttacttt
ggtccaaatcatccaatgaaaccacatcggctctgtatgactcaccatctcgttctctcg
tatgagcttcataagaagatggaaatttatcgtccccacaaagcatatcctgtggagctt
gctcagttccattcagctgattatgtggaatttctgcaccgaataactccagatactcaa
cacttgtttgccaatgaactgtctaaatataatcttggagaggattgccctgtctttgag
aacttgtttgaattctgccaaatatatgctggtggaacaatagatgctgcacgcagatta
aatcatcaactatgtgacattgcaataaattgggcaggtggcttacatcatgctaaaaag
tgcgaggcttctgggttttgttatatcaatgacttggttttggggatactagaacttctg
aagtatcattctcgtgttttatatattgacatagatgtacatcatggtgatggggtagag
gaagccttttatttcactgacagggtgatgaccgttagttttcacaagtttggggacttg
ttttttcctggaactggtgacgttaaggaaataggagaaagagaagggaagttttatgcc
attaatgttccactgaaggatggaatagatgatggtagcttcaccagactttttaggact
attatctccaaggttgttgaaatgtatcgaccaggtgtcattgttctccagtgtggagcc
gattcattggctggtgatcgattaggctgcttcaatctctctattgatggtcacgctgaa
tgtgttagatttgtcaagaaattcaatttgccattattggttactggaggtggaggttat
accaaagagaatgtagctagatgttggactgttgaaacgggtgttcttctggatacagag
ctgccaaatgaaatcccagataacgagtatatcaaatatttttctccagatcatttgcta
agaattccaaatgggcatatggaaaatttaaatacgaaatcttacattagcacgatcaaa
acacaagtcttggaaaatctccgtttcatccaacatgctccaggtgtacaaatgcaagag
gttcctcccgacttctatattcctgacattgacgaagatgagcagaatcctgatgagcgc
atgaaccggcacacccaagacaagcaaatccagcgtgatgatgaacattatgaaggagat
aatgataacgatcacgatatggatgatgcgtga

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