Cucurbita maxima (winter squash): 111483852
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Entry
111483852 CDS
T05246
Name
(RefSeq) histone deacetylase 9-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111483852
03083 Polycomb repressive complex
111483852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111483852
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111483852
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111483852
HDAC complexes
Sin3A-HDAC complex
111483852
BRAF-HDAC complex
111483852
REST complex
111483852
SHIP complex
111483852
MiDAC complex
111483852
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111483852
Heterochromatin formation proteins
Other heterochromatin formation proteins
111483852
Chromatin remodeling factors
NuRD complex
111483852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
111483852
NCBI-ProteinID:
XP_022985969
UniProt:
A0A6J1JCR5
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFANELSKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHSRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDGSFTRLFRT
IISKVVEMYRPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDHLLRIPNGHMENLNTKSYISTIK
TQVLENLRFIQHAPGVQMQEVPPDFYIPDIDEDEQNPDERMNRHTQDKQIQRDDEHYEGD
NDNDHDMDDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggataggatttcatacttttatgatggggacgttggaagtgtttacttt
ggtccaaatcatccaatgaaaccacatcggctctgtatgactcaccatctcgttctctcg
tatgagcttcataagaagatggaaatttatcgtccccacaaagcatatcctgtggagctt
gctcagttccattcagctgattatgtggaatttctgcaccgaataactccagatactcaa
cacttgtttgccaatgaactgtctaaatataatcttggagaggattgccctgtctttgag
aacttgtttgaattctgccaaatatatgctggtggaacaatagatgctgcacgcagatta
aatcatcaactatgtgacattgcaataaattgggcaggtggcttacatcatgctaaaaag
tgcgaggcttctgggttttgttatatcaatgacttggttttggggatactagaacttctg
aagtatcattctcgtgttttatatattgacatagatgtacatcatggtgatggggtagag
gaagccttttatttcactgacagggtgatgaccgttagttttcacaagtttggggacttg
ttttttcctggaactggtgacgttaaggaaataggagaaagagaagggaagttttatgcc
attaatgttccactgaaggatggaatagatgatggtagcttcaccagactttttaggact
attatctccaaggttgttgaaatgtatcgaccaggtgtcattgttctccagtgtggagcc
gattcattggctggtgatcgattaggctgcttcaatctctctattgatggtcacgctgaa
tgtgttagatttgtcaagaaattcaatttgccattattggttactggaggtggaggttat
accaaagagaatgtagctagatgttggactgttgaaacgggtgttcttctggatacagag
ctgccaaatgaaatcccagataacgagtatatcaaatatttttctccagatcatttgcta
agaattccaaatgggcatatggaaaatttaaatacgaaatcttacattagcacgatcaaa
acacaagtcttggaaaatctccgtttcatccaacatgctccaggtgtacaaatgcaagag
gttcctcccgacttctatattcctgacattgacgaagatgagcagaatcctgatgagcgc
atgaaccggcacacccaagacaagcaaatccagcgtgatgatgaacattatgaaggagat
aatgataacgatcacgatatggatgatgcgtga
DBGET
integrated database retrieval system