Clavibacter michiganensis subsp. insidiosus: VO01_14870
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Entry
VO01_14870 CDS
T03862
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00900
Terpenoid backbone biosynthesis
cmh01100
Metabolic pathways
cmh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VO01_14870
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cmh01006
]
VO01_14870
Enzymes [BR:
cmh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VO01_14870
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VO01_14870
2.5.1.29 geranylgeranyl diphosphate synthase
VO01_14870
Prenyltransferases [BR:
cmh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VO01_14870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Se-cys_synth_N
Tnp_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AJW80228
UniProt:
A0A0D5CKT4
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Position
complement(3122541..3123563)
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AA seq
340 aa
AA seq
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MNGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAA
AHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAAV
IAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDEI
LRMERLKTAVYSFEAPLQAGAVLAGARPEVVAALGDFGRDIGIAYQVVDDVLGVFGDEQE
TGKTNLGDLREGKRTVLIAHAVRSSEWGEISALVGKDDLSRGEAALVRSVLESSGARAYA
EGVARDLAVAAVARLDDPVVPEALRRELAPVAESVLGRIR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgtcctggacgcgttcttcgcccgctcgctcgtccgcgcggaggtcatgggc
gacgagtacgtgaagctgtggcgcacgctcgagtcgaacaccgcgggcggcaagcgcttc
cgtccgcgcatggtcatggccgcgtacgacggcctcggcggccaggacgtgcaggccgcg
gcccacgtcggcgcggcgttcgagatgctccacaccgcgctcatcgtccacgacgacgtc
atcgaccgcgacttcacccggcgcggcggcccgaacgtctcgggcgcctaccgcgacatc
gccaccacgcagggcctgccccagccgctcgccgagcaccgcggcatgtcggccgccgtc
atcgcgggcgacctggcgctcgtcaacgcctaccgtctcatcgacgcgagcggcgtccgc
gacctcacccggtcgcacctcatggagatcctcgacgacgccgtgttcgcgtcggccgcg
ggcgagctcatcgacgtcgagttctcgctcaccgccgatgtgccgagcgtcgacgagatc
cttcgcatggagcgcctcaagaccgccgtgtactcgttcgaggcgccgctccaggcgggc
gccgtgctcgcgggcgcgcgacccgaggtggtcgcggcgctcggcgacttcggccgcgac
atcggcatcgcctaccaggtggtcgacgacgtgctcggcgtcttcggcgacgagcaggag
accggcaagaccaacctcggcgacctgcgcgagggcaagcgcaccgtgctcatcgcgcac
gccgtccgctcgtcggagtggggcgagatcagcgcgctcgtcggcaaggacgacctctcc
cgcggcgaggcggcgctggtgcgctcggtgctggagagctcgggcgcccgggcctacgcc
gagggcgtcgcgcgggacctcgcggtcgcggccgtcgcgcgcctcgacgacccggtcgtg
ccggaggcgctccgccgggagctcgcgcccgtcgcggagtccgtgctcgggcgcatccga
tga
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