Cronobacter malonaticus LMG 23826: AFK66_007775
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Entry
AFK66_007775 CDS
T04062
Symbol
yebU
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmj03009
]
AFK66_007775 (yebU)
Enzymes [BR:
cmj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
AFK66_007775 (yebU)
Ribosome biogenesis [BR:
cmj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AFK66_007775 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ALX78268
LinkDB
All DBs
Position
complement(1618114..1619556)
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AA seq
480 aa
AA seq
DB search
MAQFGSVCLPEAFLDVMREAMPAGLAMDDFIAACQRPLRRSIRVNTLKISVLTFLEQVAP
YGWQLTPVPWCPEGFWIERDDEEALPLGSTAEHLSGQFYIQEASSMLPVAALFADGNTPA
RVMDVAAAPGSKTTQIAALMQNQGFILANEYSASRVKVLHANISRCGIRNVGLTHFDGRV
FGAALPEQFDAILLDAPCSGEGVVRKDPDALRNWSPQSNQEIAATQRELIDSAFHALAPG
GTLVYSTCTLNREENQETVRWLLARYPQAVEVLSLEALFPGADAALTEEGFLHVFPQIYD
CEGFFVARLRKTASVEPLPAPTYKVGAFPFAPMKTREAQAVIAAARKVGLEWDETLELWQ
RDKEIWLFPQAFTPFIGKVRFSRTGIRLAEVHNKGYRWQHEAVVALAGSDNPLAFELTAE
EAQEWYRGRDVWPQTVPGADDVIVTFQHQPLGLAKKVGSRLKNSYPRELVRDGVLFSAPV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaattcggttctgtctgccttcctgaagcttttcttgatgttatgcgtgaagcg
atgcccgccgggcttgcgatggacgatttcatcgccgcctgccaacgcccgctgcgtcgc
agcattcgcgtcaacacgctgaaaatcagcgtgttgacgttccttgaacaggtggcgccc
tacggctggcagttaacgcccgtgccgtggtgcccggaaggcttctggatcgagcgggat
gacgaagaggcgctgccgcttggcagcaccgccgagcacttaagcggtcagttttatatt
caggaagcgagctccatgctgccggtggcggcgctgttcgccgacggcaacacgcctgcg
cgcgtgatggatgttgcggcagcgcccggctcgaaaacgacccagatagccgcgctgatg
caaaaccagggcttcattctcgccaacgaatattccgccagccgcgtcaaagtgttacac
gcgaatatcagccgctgcggcattcgcaacgtcggcctgacccattttgacggccgcgtt
tttggtgccgcgctgccggaacagtttgacgccattctgctggacgcgccctgctccggc
gaaggcgtagtgagaaaagatccggacgcactgcgcaactggtcgccgcaaagcaaccag
gagatcgccgccacccagcgcgagcttatcgacagcgcttttcatgcgctcgcccctggc
ggcacgctggtgtactccacgtgcacgctgaaccgcgaagagaaccaggagacggtgcgc
tggctgctggcgcgctacccgcaggcggtggaagtgctctcgcttgaagccctgttcccc
ggtgccgacgcggcgctgaccgaagaaggctttctgcatgtctttccgcaaatctacgac
tgcgaaggcttttttgttgcgcgtctgcgtaaaaccgcgagtgtcgagccgctgcccgcg
ccgacctacaaagtaggcgcattccccttcgcgccgatgaaaactcgcgaagcgcaggcc
gttatcgccgccgccagaaaagtcggcctcgaatgggacgagacgcttgaactgtggcag
cgcgataaagagatctggcttttcccgcaggcttttacgccgttcatcggcaaggtgcgg
ttctcacgcactggcattcgtctggctgaagtccataataaaggataccgctggcagcat
gaagccgtggtggcgctggccggaagcgataatcctctggcgtttgagctgaccgccgaa
gaagcccaggagtggtatcgcgggcgcgatgtctggccgcagacggtaccgggcgccgat
gatgtgattgtcacttttcagcatcagccgctgggcctggcgaaaaaagtgggcagccga
ctgaagaatagttatccccgcgagctggtgcgcgacggtgttctgttcagcgcgccggtt
taa
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