Callorhinchus milii (elephant shark): 103178167
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Entry
103178167 CDS
T03088
Symbol
pdgfra
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04020
Calcium signaling pathway
cmk04144
Endocytosis
cmk04510
Focal adhesion
cmk04540
Gap junction
cmk04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103178167 (pdgfra)
04020 Calcium signaling pathway
103178167 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103178167 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103178167 (pdgfra)
04540 Gap junction
103178167 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103178167 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmk01001
]
103178167 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cmk04090
]
103178167 (pdgfra)
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103178167 (pdgfra)
Protein kinases [BR:
cmk01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103178167 (pdgfra)
CD molecules [BR:
cmk04090
]
Proteins
103178167 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
C1-set
Rrn6_HB
Sp38
Adeno_E3_CR1
LAT
Motif
Other DBs
NCBI-GeneID:
103178167
NCBI-ProteinID:
XP_007890946
UniProt:
A0A4W3INV8
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MNIFLKILLILDCVFLGVFKGPQVATCQSFPDIYPNKAEIIVKLHTSFSLKCSGDNEVDW
ELPFPTDFVTDVKKKSEENNSGQFVKSLDIENAMGTFTGRYICYYTGKQDDYDDILGRDI
YVFIPDPEHPFVPXTMFEHVVMAAFGDVVLIPCRASDPEIQATLFNIENNSTVFGIYDHK
QGFSGHFQEGTYTCTTTVNGVKYESQEYILHTFRVAETLEVEIEAPKTVVKVGEPISVTC
MVMDNEVVDIEWNYPGKDKRTIAIQTLRETRIPNLKIMKTLLIENASLEDSGVYECSVEH
ATQFTNQLRKVRISVNDKGFIHLNPHFGTQEFANLHEVKQFVVDIEAYPKPTVRWLKNNV
TLHEENNEVITNLADVQETKYQSNLTLIRAKEQDSGAYTIVVDNIDNMTTYTFDLQVKVP
AKIIDLRDVHHGSANGQIVSCFVDGTPSPEVEWLICTDLKKCANDSMLWNVLLNNSSDIS
IETFETKEHHVESKLTFQKIDNTVAVRCVAKNELAAVAREVKLVSHNLHSELTVAAAVLV
LLVIVIISLIVLVVVWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDTRWEFPREGL
VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGP
HLNIVNLLGACTKTGPIYIITEYCFYGDLVNYLHKNRDNFVSRYFEKGMKEKDIFGINPA
DESTRSYVILSFENNGDYMDMKQAESTQYVPMLERKDSSKYSDIQQSVYDHPPSHKKSLT
ESTELWNPLLDDNSDGISFMDLISFTFQVARGMEFLASKNCVHRDLAARNVLLAQGRIVK
ICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSFGILLWEIFSLGG
TPYPGMMVDSNFYNKIKSGYRMTKPEHATSDVYDLMVNCWNSEPEKRPSFTRLAEIVGNL
LPEDFKKSYEQVNNDFLKSDHPAVARMRVESDDTYIGISYTNEDKKKDRESGIDDQRLSA
DSGYIIPLPDIDPITDDSETASIRNRHSSQTSEESAIETGSSSSTFIKREEETIEDVEMM
DDVGIDPSDLAEDSFL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcttcttgaagatacttttgatcttggattgtgtctttctaggggttttcaaa
ggaccccaggttgctacctgccagagttttccagatatttatcccaacaaggcagaaata
atcgtcaagcttcatacgtcattcagcttgaagtgttcaggagacaatgaagtggactgg
gagctgccattccccactgattttgttacagatgtcaagaaaaagagtgaagagaataac
agtgggcagtttgtgaaatcacttgacatcgagaatgcaatgggcacatttactgggagg
tacatttgctattatactggaaaacaagatgactacgacgatattctgggccgggacatc
tatgttttcattccagatccagaacatccgtttgtcccancaacaatgtttgaacatgta
gtgatggctgcatttggtgacgttgtgcttattccatgtcgtgcatctgatccagagatc
caggccaccctgtttaacatagagaataacagcacagtctttggcatttacgaccataag
caaggattctccggtcatttccaagagggaacctatacctgcaccacaacagttaatgga
gtgaagtatgaatcacaagaatatattcttcatacatttagagtggctgagacccttgag
gttgaaatagaagctcctaaaacagtagtgaaagtgggtgaacctatttctgtgacctgc
atggtaatggataatgaagtggtggatatagaatggaattatccaggaaaagataagagg
actattgccattcaaacacttcgtgaaacaagaataccaaacttaaaaattatgaagacc
ctgctcattgagaatgccagtctggaagattctggagtttatgaatgttctgtggaacat
gcaacccaatttaccaatcaattgaggaaagttcgcatctctgtcaatgataaaggtttc
atccacttgaatcctcacttcggaacacaagagtttgcaaatctgcatgaagttaagcag
tttgtggtggacattgaagcttacccaaaacctactgtacggtggttaaaaaacaatgtc
acactgcatgaagagaacaatgaggtgataaccaacttggcggatgtgcaggaaaccaag
tatcaaagcaatctgactctgatccgtgcaaaagaacaagatagtggagcttacaccatt
gtagttgacaatatcgataacatgaccacttatacctttgatttacaggttaaagtgcca
gctaagatcattgaccttcgcgatgtccaccacggctctgccaatggccagatagtttcc
tgctttgttgatgggacaccaagtccagaggtcgaatggctcatttgcacggatttaaaa
aagtgtgcaaatgatagcatgctctggaacgtgctgctcaataactctagcgacatcagc
atcgagacatttgagacgaaagagcaccatgtggagagcaagttgacctttcagaaaatc
gataacacagtggccgtgcgttgcgttgccaagaatgagcttgcagccgtcgcgcgtgaa
gtcaaactggtctctcataatctacattctgaactaacggtggctgcagcagttctggtg
ctgttagttattgtgatcatttctctgatagtccttgtcgtggtttggaaacagaaacca
agatatgagatacgatggagagtaattgaatctatcagccctgatggacatgaatacatt
tatgttgaccccatgcaacttccctatgatacaagatgggaatttcccagagagggtctt
gtccttggtcgaattcttgggtctggggcctttgggaaggtagttgaaggaactgcctat
ggcttgagtcgctcacagcctgtcatgaaggttgctgtgaaaatgttgaaacccacagct
cgatctagtgagaagcaggcactaatgtctgaattgaagataatgacccatctcggacca
catttaaacattgtcaatctgctgggagcctgtactaaaacaggtccaatctacataatt
actgaatactgtttctatggagacctggtaaactacctacataagaacagagacaacttt
gtcagccggtactttgaaaaaggcatgaaggaaaaggacatttttggtattaaccctgct
gatgaaagcacaagaagctatgtgattctgtcgtttgagaacaatggcgactacatggac
atgaagcaagctgaaagcacccagtatgtgccaatgttggaaagaaaagacagttcaaaa
tattctgacatacagcagtcagtgtatgatcacccaccatcacacaagaagtcactaaca
gagtcaactgagctttggaacccacttttagatgacaactcagatgggatcagcttcatg
gatctaattagcttcactttccaggttgcacgaggaatggagtttctggcttctaaaaac
tgcgtgcatcgggatctggcagcccgcaatgtactcctcgcacaaggaaggattgtgaaa
atctgtgactttgggctggcaagagacatcatgcatgactccaactatgtctctaaaggc
agcaccttcctaccagtgaagtggatggctcctgaaagcatattcgacaatctttacaca
accttaagtgacgtgtggtcttttggcattctcctgtgggaaatattctcgctgggtggc
accccatatccgggaatgatggtggactccaacttctacaacaagataaagagtggctac
cggatgacgaaaccagaacatgcgacttccgatgtctatgacctcatggtgaattgttgg
aacagtgagcctgagaagagaccttccttcactcgtctggcagaaattgttgggaaccta
ttaccggaggacttcaagaagagctacgagcaggtgaacaatgacttcctgaagagcgac
caccctgctgttgcgcggatgagggtggaatctgatgacacctacattggaatcagctac
accaacgaggataagaagaaggatcgggagagcggaatcgatgaccagagactaagcgcc
gacagtggttacatcatcccacttcctgacatcgaccccatcacagacgacagtgaaact
gcttcaataagaaaccgacacagttcccaaacttctgaagaaagcgcaatcgagacaggc
tccagcagctcgacttttataaagcgagaggaagaaactatagaggatgtggaaatgatg
gatgatgtaggaatcgacccctcagaccttgcggaagacagctttctgtaa
DBGET
integrated database retrieval system
