Callorhinchus milii (elephant shark): 103184239
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Entry
103184239 CDS
T03088
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04120
Ubiquitin mediated proteolysis
cmk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103184239 (ube4b)
04120 Ubiquitin mediated proteolysis
103184239 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103184239 (ube4b)
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103184239 (ube4b)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
U-box type E3
103184239 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
103184239
NCBI-ProteinID:
XP_007900336
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MEELSADEIRRRRLARLGGGQTSQPTTPLTSPQRENPPGASAATTPGMTQSMGLSAQGMT
PATSPIGATGAAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSISQVD
VDSGIENMEVDEGDRREKRSLTDKEPSSGSDVSEEQTLLLICKIFRVSWKERDRDVIFLP
GLAAEFKYNSKEVFSDWKDLIGQILMEVLMLSTQMPEDNPFASLTATSQPIAAAARSPDR
NLTLNPPSSHGTSPMFCSPSSFGASSLSSLYGTSPGFRSFTASHASTSASPASQPSLAIS
PHSLVSNPCVRSLATSSSSAQTSSSRHPPLTTNSLPLSTSPRPRTVAMSPLPIVINYSAP
QTVATSPSPIQASSPRQRPSIMGPPLFPVTPPAAMPRSTQHNQLPSSLYNNPFSLFLFAL
ADLPGDSSDDEDDEEDAPDEEEDDVDLSSVQFGSSLGTNGGCSTESGSDRFTIEACKETE
MLNYLIECFDRVGIEERKAPKMCCQPSVSQLLSNIRSQCISHAALVLQGALTQPRSLLQQ
SLLVPYMLCRNLPYGFIQELVRMTHQDSEVFKQIFFPIIQGLAMAVKECSLDGDNFKYPL
VALQELCEIKFGKTHPVCNLVASLPLFLPDSLSQGTGRELQKLSVLGSFFSLSVFAEDDT
RVVEKYFSGPTLTLENTRVVSQSLQHHLESARSDLFKILHNILLNGETREAALNYMASVV
NRNMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPKCRINIPADET
RVKASMEDIKSWLAELNEQSKFAEPKFPTECFFLTLHAHHLAILPSCRRYIRRLRAIRDL
NRTVEELKNSESQWKDSPLANRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQF
YGTLIQLIFRMVDPRYPDMTLPLIAEVPKVFAALPEFYLEDVAEFLLFIVQYSPQVLYEP
CTQDVVTFLIVFICSQNYIRNPYLIAKLVEVMFVTNPAVQPRTQKFYEILENHPLATKQL
VPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNVAHQGTFMEEFNSGKQFVRY
INMLINDTTYLLDESLDSLKRIHEVQEEMKNKERWDALPRDQQQSRQSQLTQDERVSRSY
LALGAETVDMFHYLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGF
EPKKLLDQLTDIYLHLDCPRFAKAIADDQRSYSKELFDEVILKMKKAGIKSTIAIEKFRL
LAEKVEEIVTKNARAEIDYGDAPDEFRDPLMDTLMNDPVKLPSGTIMDRSIILRHLLNSP
TDPFNRQHLTENMLEPVPELKEKIHTWMREKQHANRSLQ
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttagcgccgatgagatccgtagaagacgccttgctcggcttggtggcgga
caaacgtctcaacccaccacaccgctcacgtctcctcagcgagaaaatccaccgggggca
tctgcagcaacgacgccaggcatgactcaaagtatggggctcagtgcccagggcatgact
ccagccacatctcccattggagcaacaggtgctgcccatcgaagccagagtagtgaaggg
gtgagctcgctcagtagttccccatcaaacagccttgaaacccagtctcagagtctctcc
cgatctcagagtatggatattgacagtgtatcctgtgagaaaagcatatcacaagtggat
gtggattcggggattgaaaatatggaagttgatgagggtgatcgcagagaaaagaggagc
ttaaccgataaggaaccttcttcggggtcagatgtatctgaagaacaaacacttttgctt
atatgtaagatcttccgagtttcctggaaggagcgtgaccgggatgtgattttcctgcct
ggtctggccgcagagttcaagtataattcaaaagaagttttttcggactggaaagatttg
attgggcagattctgatggaggttctgatgttgtccactcaaatgccagaagacaaccca
tttgccagtttaactgccacgtctcagccaattgcagccgctgcacgatcgccggacagg
aacttgaccctgaaccctccatccagccacggaacaagtccgatgttctgtagtccgagc
tcgtttggagccagttctttatcaagtctgtatggaaccagcccaggttttcgatctttt
actgcaagccatgcctccacgagcgctagtccagctagccagccttctcttgctataagc
cctcattcattggtgtccaatccttgtgtgcgttccctggctaccagttcttcctcagca
cagaccagttcttcaaggcatccgccactgaccaccaactctctgccattatcaacgtct
cccaggccacgaactgttgctatgagtccgttgcccatcgtgattaattattctgcccca
caaaccgtggccactagcccatcaccaatccaagcaagttctccaagacaacggccctcc
ataatgggcccacctttatttcccgtcactcctccagcagcaatgccccgctcgactcaa
cacaaccaactaccttctagtctctacaacaaccctttctcccttttcctcttcgctctt
gccgatttgcctggagacagcagtgatgatgaggatgatgaggaggatgctcctgatgag
gaggaagatgatgttgatttgtctagtgtgcagtttggttccagtttgggtacaaatgga
ggctgctccacagagtctggcagtgaccgcttcaccattgaagcttgtaaagaaaccgag
atgttgaactacctcattgagtgctttgacagagttggaatcgaagagagaaaagctcca
aagatgtgctgtcaaccatctgttagtcagctgctcagtaacatccgatcccagtgtatt
tcccatgctgcactcgtgcttcaaggagccctcacacaaccaaggtccttgctccagcaa
tctttgctggttccctatatgttgtgtcggaatcttccttatggcttcattcaagaacta
gttaggatgactcatcaggactctgaagtattcaaacagatcttctttcccattatacaa
ggactagcgatggcagtgaaagaatgttccttggatggtgataatttcaagtatccactt
gtggcattacaagaattgtgtgaaatcaagtttgggaagacccatcctgtatgtaacctg
gttgcctcactgcctttatttctgccggattcactgagtcagggcactggcagagagctg
caaaagctatcagttcttggctctttcttcagtctctctgtctttgcagaggatgataca
agagttgtggagaaatatttctcaggacctacacttacccttgaaaacaccagagttgtt
agtcagtccttgcaacaccatctggagtcagccaggagtgatctcttcaaaattttgcac
aacattttacttaatggtgagaccagagaagctgctttaaattacatggcatctgtggta
aaccgcaatatgaagaaagcacagatgcaaacagatgaccggttggtatccacggatggg
tttatgctgaacttcctgtgggtgttgcagcaactgagtaccaaaatcaagctggaaact
gttgacccaatgtatattttccatccaaagtgtcgcattaacatacctgctgatgagacg
cgtgtcaaagcctctatggaggacatcaaaagttggctcgcagagctcaacgagcagtca
aagtttgcagaacccaaattcccaacagaatgttttttcctgactctacacgcacaccat
ctcgccattcttcccagttgtcgccgatatatccgaagactacgagctattcgagatctc
aacaggacagttgaagaactgaaaaatagtgagagtcagtggaaggattctcctctagca
aaccgacatcgagaaatgctgaaacgctgcaaaactcagttgaagaaactggtgaggagc
aaggcctgtgctgatgctggcttgttggatgaaaacctgttaagacggtgcctccagttc
tacggcacgttaatccagttgatctttcgtatggttgacccacgctacccagacatgaca
ctgcccctgatcgcagaggtccccaaggtgtttgcagcgttgcctgaattctatttggaa
gacgttgctgaatttttgctgtttattgtacaatattcccctcaggttttgtatgagcct
tgcactcaggacgtagtgaccttcctcatcgtatttatctgtagtcagaactatatccga
aatccatacctgattgccaaactggtggaagtcatgtttgtgacaaacccagcagttcag
cctcgaacgcagaaattctatgaaatcctggagaatcacccgctggccacaaagcaactg
gtgccatctttaatgaaattttacacagatgttgaacatacaggagcaacgagcgagttc
tatgataaatttactattcgctaccacatcagcacaatcttcaagagtctctggcagaat
gtggcacatcaaggcacctttatggaagagtttaactctggaaagcagtttgttcgctac
atcaatatgttgatcaacgatacaacatacctactagacgagagcttggattctctcaaa
aggattcatgaggtccaggaggaaatgaagaacaaagaacgctgggatgctttgccaagg
gaccagcagcagagtcggcaatcacagctaacccaggatgagcgtgtgtctcgttcatac
cttgctcttggtgctgaaactgtggacatgttccattatctcaccaaacaagttcaaaaa
cccttcctcagacctgaacttggtccacgtttagcagcgatgctgaatttcaatctgcag
cagttgtgtgggcctaaatgccgcgacctgaaagtcgaaaatcccgagaaatatgggttt
gaaccgaagaagcttttggatcagctgactgacatttacctgcacttagactgtccccgg
tttgccaaggccattgctgatgatcagcgatcgtacagtaaagaactctttgacgaagtc
attttgaaaatgaaaaaggctggaatcaagtcgactatcgcaatcgagaagtttcggctg
ctggcagaaaaggtggaagaaatcgtcacaaagaacgcacgggcagagattgactatggg
gatgccccggatgagttcagagatccactgatggacaccctgatgaatgatcctgtgaag
ctgccctctgggaccataatggaccgctctattattttaagacacttattaaattctcca
acagacccatttaaccgacaacacttgacggagaatatgctggaaccagtgcctgaactg
aaggaaaagatccacacctggatgagagagaagcaacatgcaaatcgttccttgcagtga
DBGET
integrated database retrieval system
