Cucumis melo (muskmelon): 103492255
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Entry
103492255 CDS
T03195
Name
(RefSeq) probable RNA-dependent RNA polymerase 5 isoform X1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103492255
Enzymes [BR:
cmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
103492255
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
103492255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
103492255
NCBI-ProteinID:
XP_008450775
UniProt:
A0A1S3BPE5
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All DBs
Position
2:1458927..1473348
Genome browser
AA seq
1017 aa
AA seq
DB search
MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR
NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSLS
SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRVYVDWDRRKTHIYHCYVALDG
SYRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTHLPNHTGGSFYAYNKIARDGILL
GLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLF
MHAHMVSSIASYMARFSLILSKTIKLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIH
TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLI
QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPK
RTFLSRNLIALLNYGGVPREYFMTILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR
MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTCTLESGEVCVIL
ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYAIFFSSKGPRSVADEIAG
GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNRKPKEFSVEELENELFKLFLSTR
FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILQLINIYYDALDAPKKGGKKI
EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY
IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNDDVYQ
EALAIYQVTYDHAMSHSVRNCVFAWKVAGSALFKLYAIKHSERSFLCLPSVMREIFS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcatttcttggaagtctctcttccaccttcggttgagcattttcttcttcag
atatgtgagctacatgatcagccactgccggatgctgaagtgcgatgggcgttagcttca
gtgggggaagtagctgctcttgatgctctccataagatctcctgtagctcccctgtaagg
aaccttagcggttttattctgcatatggttcgtaaggattcttgtgcttctcctcagaac
aagatggttcgtgtttctcctcatcagagtccttcttcctgttgccgtgtttctcagctt
cagagtccttcgacttgctctgtttctttgcatcaaagtctttcaactttctctcttagt
agcggccaagggctaggaactgctgagaatgcaagctttcagccgccaactccagaaaag
tccggaagcttttcatcttcggtttcggacagagcaaggatttcgcaatttgtggctttg
ggagaacttgagtttaggaaggcatttttattattgagttacattgggggagaaagcctt
gaaagggtcacaacagcagagcaaattcaaagtctaagccaattagcgatggaaaaattt
gaggacgaagtttggaaaatatttggtaaaaaatacattactaatgaagaacgacgagtg
tatgttgactgggatcgtaggaaaacacacatttaccactgttatgttgctttggatggg
agttacaggttcaagggtccatttttgaacaatacaaaaactcatctacaaagggtttta
ggcgatgacaatgttttgatggtcaagtttgctgaagataaatctgatacgcatttgcca
aaccatactggtggttccttttatgcgtataacaagattgctagagatggcattcttctt
ggattgcgtcgataccgtttttttgttttcaaagatggtgggaaggaggaaaaaaagaag
aatccgaccacatcagctgtgaagtgctattttgtcagaatggagtcagatgcatatgtt
gataagattgaaccttataaattatcaaatagaacagtttttgaagcaaggagtcttttc
atgcatgcacacatggtgtctagtatagcaagctacatggctaggttttcactcattctg
tcaaagaccataaaactgaaaattgatttgtctacagtaaaagttcaaagaatcggggat
ataccttgcaaggatatctatggcaatgtcatatatagagatggaaaacctcttatacat
acagacggaacaggatttatatcagaggacttggctttggagtgccctatgaatgtattt
aaagggcaggcaaagcatgatgctgatcttaagagaattcctgcttttgaaggatttcag
aataagactttgccactaacacttccaggacttgaattgcgagaaccacccttgctaatt
cagttccgacttttttacaatggccttgctgttaagggaacatttctagtgaataaacag
cttcctcctagaacaattcaaatccgcgattctatgatcaaagttgaaatagatccagat
cttgtaaattttgaaacagagaattcactggagttagtagggaccagtaatcccccgaag
aggacatttctttcaagaaatttaatagcactcttgaactatggaggtgttccaagagag
tacttcatgactatccttgtggatgctttaaaagatgttcagggtgttttctccagtaag
cgtgcagctttaagagtttccattaacaatggtgaaatggatgactttctggttgcaaga
atgattttagctggcattcctcttgatgaatcatatttgcaatatcggctatctgtgcta
ttgaaggaggagaaaaagagcttgaaaagtggaagacttcacgtgcctgaatgttattat
ttaatggggacagtcgatcccacctgtacacttgaaagcggcgaagtctgtgttatcctt
gaaaatggacaaatcaacgggaaggttcttgtttatcgcaatcctggtctacattttggt
gatatccatgttttaacagctaaatatgtggaggagttggttcctgttgttggaaatgcg
aaatatgctatattcttttccagtaagggtccccgttcagtagctgatgaaatagcgggt
ggtgattttgacggcgatatgtactgggtttccagaaattcgcagttgttagagtatttc
agaccatgtgaaccatggaggccaagtccttcaacggaagtagttacaaatagaaagccg
aaagaattttctgtcgaggaattggagaatgagctatttaaactattcttgtctactagg
tttcagccaagttatgcaaagagtgttgcagctgataactggttggcattgatggatcag
tttctaatgttgggtgaagagcgtaaagaagaaagaaatcgtataagggcaaagattctg
cagttgatcaatatatattatgatgctttagatgcacctaaaaaaggtgggaagaagatt
gaagttccaaaacacctaaaggcaggaactttacctcatttcatggaaaggggaaaaaat
tcatatgtttcaacttcaattcttggacaaatttttgacaccgttaacatgtatcaagaa
gaagtgccaaacattgaggttcagaaacttccttgctttgaagaggaagtgcccgaatat
atcttcatgaagtggaagtttctctatgagttgtacagaaaagacatggtggacgccatg
cagcttgatcccgatgccaaaaacatagctgctgaagccacaattaagaagtacaaggag
atattgtatggtgctgaagaactcgaggggagcccgaggtcgaatgatgatgtataccag
gaggctcttgcaatttatcaagttacatatgaccatgccatgagccacagtgtgcgcaat
tgcgtctttgcatggaaagttgcaggttcggctctcttcaagctctatgctataaaacat
tctgaaagaagctttctttgtcttccttcagttatgcgtgagatttttagttaa
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