Caldicellulosiruptor morganii: OTK00_000643
Help
Entry
OTK00_000643 CDS
T08774
Name
(GenBank) RNA polymerase sporulation sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
cmor
Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:
cmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmor03021
]
OTK00_000643
Transcription machinery [BR:
cmor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OTK00_000643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
DUF4712
HTH_38
HTH_29
Recombinase
GerE
HTH_23
RasGAP_C
Sigma70_r4
Terminase_5
DUF1676
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WAM34440
LinkDB
All DBs
Position
677978..678616
Genome browser
AA seq
212 aa
AA seq
DB search
MTSQKQLLNFKDCTDEELVRYSKEGIKEATEELLNRYQNFVKAKCRVYFLIGAEKDDIYQ
EGMIGLFKAVRDFDESKYPTFRLFAELCITRQVITAIKTASRQKHIPLNTYISLNKPVYE
ENDERTLLDTIANSLISDPEEVMITKEEFENALNVITGCLSPFENRVLSLYLEGRSYQEI
AEMINKDVKSIDNALQRVKKKIEKYFGSMHNQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgacatcacaaaaacagctactgaatttcaaagactgtactgatgaagagcttgtaagg
tattcaaaagagggtataaaggaagctacagaagagcttctaaacaggtatcaaaatttt
gtaaaggcaaagtgcagggtatattttctgatcggtgctgaaaaggacgatatttaccag
gagggtatgataggactttttaaagctgtacgtgattttgatgagagcaaatatcccact
ttcaggttatttgccgagctttgcattacaagacaggtgataactgcaataaaaactgca
agcaggcaaaaacatatccctcttaacacgtacatatccctgaacaaacctgtgtatgag
gaaaatgatgaaaggacgttgcttgacactattgcaaattctctaatatctgaccccgag
gaggttatgattacaaaagaggagtttgaaaacgcgttaaatgttatcacggggtgcttg
agcccttttgaaaacagggttttaagcctctatcttgagggaaggagctatcaggaaatt
gccgagatgattaacaaggatgtaaagtctattgacaatgcgcttcagcgagttaaaaag
aagattgaaaaatactttggaagtatgcataaccagtga
DBGET
integrated database retrieval system
