Cucurbita moschata (crookneck pumpkin): 111430523
Help
Entry
111430523 CDS
T05248
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111430523
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111430523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
111430523
NCBI-ProteinID:
XP_022922555
UniProt:
A0A6J1E943
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MKLIFLSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTL
QVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTING
GGKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSD
IHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGIS
VGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPII
IDQYYTSFASTRENKEMGIKVSDVTYRGVNGTSADENVITFNLEEL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttatttttctgtcgggttttatctttttcactgtttcgtggactgtattagct
tcatcttctttcaatgttctcgattatggagctgctggaaatggcgaaactgatgataca
gaagcttttgtgaaagcttggaaggatgtctgtgaagcaaccgatgacattccaacattg
caagtacctgctgcaaaaatttaccttttgaaccctatcacatttgaaggtccttgcaag
tctgaacaagtcaatttcgagcttaaaggaactctaatggctccgagcaaagatgcatgg
ccaaatgataacgataaatggattcaatttgtggacatagatggacttactatcaatgga
ggaggaaaaataaacggccaaggttctctttggtgggaaggttgtgaagaacactgcgat
cacccaacggcattatttttccacaattgcaacgggcttcatttacagaataccgaacac
attgacagtgccaagaatcacatctccataaatttttgcaatgatgtcactgtctcagat
attcacgttaatgctcctgaagacagtcctaatacagatggaattgacatttctagatca
acaaatgttattattcaaaattctttcatgttaacgggggatgactgtattgccattaac
aatggatcttcatacattactatcaagggggttacttgtggccccggccatggtataagc
gttgggagcttgggagaagatgggcaattcaactctgtcgaaaatatctatgtgagcgat
agccttttgaagggaactcaaaatggagttagaatcaagacgtgggagagcggatatgga
tatgcaaggaacatcacatttgaacaaataacattcgaggatgtaaaaaacccgatcatt
attgatcaatattacacatcttttgcatctacaagggaaaataaggaaatgggcataaag
gtgagcgatgtgacttatcgaggagttaatggaacatcagcagatgaaaacgtaattact
ttcaacttggaggaactctaa
DBGET
integrated database retrieval system
