Cucurbita moschata (crookneck pumpkin): 111460635
Help
Entry
111460635 CDS
T05248
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111460635
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111460635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
111460635
NCBI-ProteinID:
XP_022959610
UniProt:
A0A6J1H6S3
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL
GDEMGLGKTLQAISFLSYLKVHQISPGPFLVLCPLSVTDGWASEIVRFAPHLNVLQYVGD
KETRRNSRRRIFEHATSQSVTDVVFPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRL
KNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEA
GDLTSGNGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQR
KVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQ
ASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFA
AIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQR
AHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEETEEIAGNETGDL
RSIIFGLRIFDQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSN
GCDLSIREGTTSVNFDPGLDEASYRSWVEKFKEASHSGANQIMELENRKALSRDKSLKLE
AVKKKAEEKKLAKWEALGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEP
TIIFSCVDDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKQESD
KAPQWVALGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSD
RSEWYTVERLLRKYASIYSIKIHVYYYRRTS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgagagaaggctaaaagcagcggcgaagctcatacttctccatgattctgag
tccgacaactccccgaagtcctgcccggacgtcggagttacggcgactctgaagccctac
caagtcgaaggagttctatggctaattcggcgatatcatcttggcgtcaacgttattctt
ggtgatgagatggggctggggaagacattgcaagctatttcttttctgagttacttgaag
gtccatcagatatcacctggcccatttttggtattatgtcctttgagcgttacagatggt
tgggcatctgagattgtcagatttgctccgcatctaaatgttcttcagtatgttggagat
aaagaaactcgacgaaattctcgcaggcgcatttttgagcatgcaacatcacaatcagtg
actgatgtcgtgttcccttttgatgttctgttgacaacgtatgacatagcattgatagat
caagacttcctctctcagatagcctggcaatatgctgtcattgatgaagcacagagactt
aaaaacccttcaagtgttctgtacaatgtacttaaagagcgttttcttatcccgaggcgg
ttattgatgactggaactcctattcagaacaatctcagtgaactttgggccttattgcat
ttctgcatgccttcagtgtttggaacactggatcagtttatttctacgttcaaggaagct
ggagatcttacttctggtaatggaaaaattcatggaaatgggcaatttaagagtttaaag
tatatactatcagccttccttttgagaagaacaaaagccaagcttagtgaatctggagtt
ctgttgctcccaccacttactgagataacagtgatggtaccattggttaaccttcaaaga
aaggtctatatgtcgatattgaggaaggagctgcctaaactacttgcactttcttctgga
tcctcaaatcaccaatctttacagaatgtcgtgatgcaacttcgaaaagcttgtagccat
ccttatctttttcctggtattgagcctgaaccttatgaagaaggcgagcacctggttcag
gctagcggcaagcttgtgattctagatcaagtacttcagaaactacatgagtctggacat
cgtgtgctcttatttgctcagatgacccatacacttgatatattacaggacttcttggag
ttgcggaatttttcctatgagcgtcttgatggatcaattcgagccgaggagcgttttgct
gcaatcaggagcttcagcttgaactgtagtgggagttctcaaacaacccgtaatgatgca
tttgtttttttgatctcaacaagagccgggggagttggtttgaatctagtatcagctgat
acggttatattctatgaacaagattggaatccacaggtggacaagcaagctttacaaagg
gcacatcgaattggtcaaataaatcatgtgttgtctataaacttagttacagcccaaact
atcgaagaagttattatgcgtagggcggaaagaaagttacaacttagcaaaaacgttatt
ggtgaagattatatagatgaggaaacagaagaaattgcagggaatgaaactggtgacttg
agatcgatcatatttgggttacgtatttttgatcaaggtcaaatggacaatgaaaaatca
ggggagtttgaggcgtcaaatgtcagtgcaatggctgaaaaagttgttgcagtacgccat
aaaaaagtatcaaacaaggatgatgcaagctttttggtcaatacaatgactttatcaaat
ggttgtgatctttctattcgagaaggtactacctcggtcaattttgacccaggccttgat
gaggcatcgtatcgttcttgggtagagaagttcaaggaagcatcccattctggtgctaac
caaatcatggagttggaaaaccggaaagctttatctagagataagagcctaaaacttgag
gctgtaaagaagaaagcagaagaaaagaaactggcaaaatgggaagcccttggataccat
tcgttatctgttgaagacccaatcttgcctcttgatagtgatccaatttcggattctggc
tctgttcattttgtctatggggactgcacacatccgtcattgaattgtatatctgagcct
acaatcatattcagttgtgttgacgattctggaagctgggggcatggcggaatgtttgat
gctctggcaaagctttctgatagcatcccttctgcctatgaacgagcttctgaatttagg
gacctacatcttggtgatcttcatctcataaaactcgaggacaacaaacaagagagtgat
aaagctcctcaatgggttgctttgggtgttgtacaatcttataatccgaggcggaaagtc
cccagaagcaagatttctcttccagatttggagaactgcatattaaaagcatcatctgca
gcgtcgcaacattctgcttcaatccacatgccgcgtattggttaccaagacggatcagat
cgctccgagtggtacaccgtggaacgtcttctccgaaaatacgcctccatctacagcatt
aaaatccatgtgtactactaccggaggacatcttga
DBGET
integrated database retrieval system
