Clavibacter sepedonicus: CMS0720
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Entry
CMS0720 CDS
T00678
Symbol
secD
Name
(GenBank) protein-export membrane protein SecD
KO
K03072
preprotein translocase subunit SecD
Organism
cms
Clavibacter sepedonicus
Pathway
cms03060
Protein export
cms03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CMS0720 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CMS0720 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cms02044
]
CMS0720 (secD)
Secretion system [BR:
cms02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CMS0720 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_1st
SecD_SecF
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
CAQ00840
UniProt:
B0REC2
LinkDB
All DBs
Position
764558..766369
Genome browser
AA seq
603 aa
AA seq
DB search
MAKSPTPVRKARRKLIWLLVIIGILAGGNAASVAFSNGSWTPKLALDLEGGTQIILAPQL
DGASSGPTSEQLAQAVSIIRQRVDASGVSEAEITTQGGSNIVVSLPGEPDAATMQRLQSS
AKLELRPVLIGAAGTASVAPTPTPTDGSAPADGTTPTDGSTPAAEAPAATPDPSTLSDEP
TAEPTGPSDVSWVTPRLQAEFAAYDCATAPESDGQAAPADRAIIACSDDGAAKYVLGPVE
VDGSTISDATSGLQQSSQGVSTGTWSVNLVFDGDGTKQFGDMSTRLITLESPRNQFAFVL
DNEVISAPVTQGVVTNGKPSITGNFTQESAKALADQLKFGALPLSFTLQSSDVISATLGS
SQLTSGLIAGLIGLVLVVLYSLVQYRALGMVTIASLVIAAVITYLLITLLSWREGYRLSL
AGVAGLIVAIGITADSFIVYFERIKDELRDGRGLVSSVEQGWKRALRTIIASDTVNFLAA
AVLFILAVGNVKGFALTLGLTTIIDLIVVSLFTHPILQLLANRRFFAEGHRMSGLDPRAL
GAVYRGRATFRTPTATTGRRAAAAKEAARRQTIAERKAAQQATGSTKTATIDAPRADDTS
RDD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagtcgcccacaccggtacgcaaggccaggcgcaagctcatctggctgctggtc
atcatcggaatcctcgcgggcggcaacgccgcgagcgtggcgttcagcaacgggtcctgg
accccgaagctcgcgctcgacctcgagggcggcacgcagatcatcctcgcgccacagctc
gacggcgcgtcgtccggacccacgagcgagcagctcgcccaggcggtgtcgatcatccgc
cagcgggtcgacgcgagcggcgtctccgaggcggagatcaccacgcagggcggcagcaac
atcgtcgtgagcctgccgggcgagcccgacgcggccaccatgcagcgcctgcagtcctcg
gccaagctcgagctgcgtcccgtgctcatcggcgcggccggcacggcgtcggtcgccccg
acgcccacgcccaccgacggatcggctcccgcggacggcacgacgccgaccgacggatcc
acccccgcggcggaggcgccggcggccacgcccgatccctccaccctctccgacgagccc
accgcggagcccacgggccccagcgacgtctcctgggtgacgccgcgtctccaggccgag
ttcgccgcgtacgactgcgcgaccgcacccgagagcgatgggcaggcggctccggccgac
cgcgcgatcatcgcgtgctccgacgacggcgccgcgaagtacgtcctcggcccggtcgag
gtggacggcagcacgatctccgacgccacgagcggcctgcagcagtccagccagggcgtc
agcaccggcacgtggtcggtcaacctggtcttcgacggcgacggcacgaagcaattcggc
gacatgtccacccgcctcatcacgctggaatcgcctcgcaaccagttcgcgttcgtgctc
gacaacgaggtcatctccgcgccggtcacgcagggcgtcgtcacgaacggcaagccgtcc
atcaccggcaacttcacgcaggagagcgccaaggcgctggccgaccagctcaagttcggc
gccctcccgctcagcttcaccttgcagagctcggacgtcatctcggccaccctcggctcg
tcgcagctcaccagcggcctcatcgcgggactcatcggtctcgtgctcgtggtgctctac
tcgctcgtgcagtaccgggcgctcggcatggtgacgatcgcgtcgctcgtgatcgccgcg
gtgatcacgtacctgctcatcacgctgctcagctggcgggaggggtacaggctgtctctc
gccggggtggcggggctcatcgtggccatcggcatcacggcggactcgttcatcgtgtac
ttcgaacgcatcaaggacgagctgcgggacggccgcgggctcgtctcctccgtcgagcag
gggtggaagcgcgcgctgcgcacgatcatcgcgtccgacacggtcaacttcctcgcggcg
gcggtgctgttcatcctcgcggtgggcaacgtcaagggcttcgcgctcacgctcgggctc
acgacgatcatcgacctcatcgtcgtgtcgctgttcacgcacccgatcctgcagctgctg
gcgaatcggcgcttcttcgccgagggccaccgcatgagcgggctcgacccgcgggcgctg
ggtgcggtgtaccggggccgcgccacgttccgcacccccaccgccaccacgggacgccgc
gccgccgcggccaaggaggcggcacgtcggcagaccatcgccgagcgaaaggccgcccag
caggcgacaggatccacgaagaccgcgacgatcgacgcgccgcgggccgacgacacgagc
agggacgactga
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integrated database retrieval system
