Cordyceps militaris: CCM_01096
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Entry
CCM_01096 CDS
T03108
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cmt
Cordyceps militaris
Pathway
cmt03022
Basal transcription factors
cmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCM_01096
09124 Replication and repair
03420 Nucleotide excision repair
CCM_01096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_01096
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_01096
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CCM_01096
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CCM_01096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
DUF3797
zf-RING_2
zf-C3HC4_2
zf-RING_10
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
18163129
NCBI-ProteinID:
XP_006666317
UniProt:
G3J359
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAVSLRHSSATNGNSAAALDGDDEACPVCKTTRYFNKDMEFRINTECYHRMCKTCVERIF
KDGPNQCPYAGCHKTLRLRGFKAAYFADLGVEREVDIRRRVAAVFNQAEDDFDGLASYND
YLYMVECLTDDLTNGGDAARAAAEARLADYEARHKAEIERNRRLAKESDEARQRRLAAEQ
ESARQRRLQDLRDDADAKTSAARFREEMLDSLQSADVGHAAAAVHKIVLKKRGQQQQQQQ
HQRATLDSAAGGGLSIRGLRDKKAAAADAAAESKKPYDPYGGLDLTTQRVDLAPAQLPQY
TSEWLDVTRSKHEYTVGGYSADEYLTRALFEAFSGLGVFVDEEKETR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcgctgcggcactcgtcggccaccaacggcaacagcgcggccgcgctggac
ggcgacgacgaggcgtgccccgtgtgtaagacgacacggtacttcaacaaggacatggag
tttcgcatcaacaccgagtgctaccaccggatgtgcaagacgtgcgtggagcgcatcttc
aaggacgggccgaaccagtgcccgtacgcgggctgccacaagacgctgcggctgcgcggc
ttcaaggcggcctactttgccgacctgggcgtcgagcgcgaggtggacatccggcggcgc
gtcgccgccgtcttcaaccaggccgaggacgactttgacgggctcgcgagctacaacgac
tacctgtacatggtcgagtgcctgaccgacgacctgaccaacggcggcgacgcggcgcgc
gccgccgccgaggcccgcctcgccgactacgaggcccgccacaaggccgagattgagcgc
aaccgccgcctcgccaaggagtcggacgaggcccgccagcgccgcctggccgccgagcag
gagagcgcgcgccagcgccgcctgcaggacctgcgcgacgacgccgacgcaaagacgagc
gccgcgcgcttccgcgaggagatgctcgactcgctgcagagcgccgatgtcggccacgcc
gccgccgccgtccacaagattgtcctcaagaagcgcggccagcagcagcagcagcagcag
caccagcgggccacgctggattcggcggctggcggcgggctgtcgattcgcggcttgcgc
gacaaaaaggccgccgccgccgacgccgccgccgagagcaagaaaccgtacgacccgtac
ggcggcctggacctgacgacgcagcgcgtcgacttggcgccggcacagctgccccagtac
accagcgagtggctggatgtgacccgctccaagcacgagtacacggtcggcgggtatagt
gctgatgagtacctcacgcgcgcgctctttgaggccttttcgggcctgggcgtctttgtg
gacgaggaaaaggagacacggtag
DBGET
integrated database retrieval system
