Cordyceps militaris: CCM_02633
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Entry
CCM_02633 CDS
T03108
Name
(RefSeq) SWI-SNF complex subunit Snf5, putative
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cmt
Cordyceps militaris
Pathway
cmt03082
ATP-dependent chromatin remodeling
cmt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CCM_02633
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CCM_02633
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmt01009
]
CCM_02633
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_02633
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_02633
Protein phosphatases and associated proteins [BR:
cmt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CCM_02633
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CCM_02633
SWI/SNF complex
CCM_02633
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CCM_02633
PBAF complex
CCM_02633
SWI/SNF complex
CCM_02633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
18164660
NCBI-ProteinID:
XP_006667848
UniProt:
G3JAU9
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MQGAPEPFANHAHLRPPGVAPIAHEPRLAFPLPKSTFPSIAILFLRVFVVVVPPSRRRTW
CLVRFALPCVRAPPSTSAAGSGHATPTAGAGASSASDSHSNPKASAENSPAPPLEPIDRT
KDSFTKLMVERYTSRDAIAAAALSDQLNHTRISTSYQRQKINEYRHIRTDYQPVFTPGRL
YGDGYRGYANGFTENHAPARIVYPSQKIRPGRRTTPALKYPRKDMIKQAELHEELVPVRI
EVEWDKYKLRDTFTWNLHDRLLPVELFAAQLVEDIGVKPPAAQPVFEQIVSQMREQLTDF
YPFVFSEEDALDPELPYSAYKNDEMRILVKLNITIGPHTLVDQFEWEINNPSNSPEEFAA
NMARDLSLSGEFTTAIAHCIREQSQLFTKSLYSVGHSFDGRPIEDSDLVSAFLQTPVPAV
FRPQQQAKEYAPYMYEMSDADLDRNETIFSREQRRQKRSINRRGGPQLPDLRERQRTIRT
LMVSSVLPGAAETIEETGLFKRAAGIRKRPTREGDISESDESDDSAPDSPAPSQFAGTAR
TRGMRGAASAAQHRMSNLGRSETPDALHHEASAGGVGGRSSRRFREETEDVPRLVVTLKV
NKDKFRRLLRGEYRFSHTTPSQPPTPSQGGATPKVLAKAMPPTSTPSRGISTTPVPIPHV
VGKFPPGQIGRLPAPPPVPGQQHTPPNPPEWLVQALRGLEKKYPDGDRFEAIMKYSYLDP
ITELPVQIHPLPDGVKYAWLPRIRCLDCTSKLYTPGPDMTAQKFETHLRFSSHREAVRAR
VVADGGGGGGGRSGSSASS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcgccccggagccctttgcaaaccacgcccatttacgaccacccggtgtcgcg
cccatcgcccacgaaccgcgcctcgccttcccgctccctaaatctacatttccatcaatc
gccatccttttcttgcgcgtttttgtcgtcgttgtgcccccctcgcgccgtcgcacttgg
tgcctcgtccgtttcgccctgccctgcgtgcgcgcgccgccttccacgtcggccgcgggc
tctggccacgcgacgcccaccgccggcgccggcgccagctccgcctccgatagccacagc
aatcccaaggcctcggccgagaactcgcccgcgccgcctctcgaacccattgaccgcaca
aaggactccttcaccaagcttatggtggagcggtacacgtcccgcgacgccatcgccgcc
gccgccctctcggaccaactcaaccacacgcgcatatccacaagctaccaacggcaaaag
atcaacgagtaccgccatatcagaactgactaccagcccgtatttactcccggccgatta
tacggcgatggctaccggggctatgccaatggctttaccgagaatcatgccccagcccgc
atcgtctaccccagtcaaaagatccgccccggtcgccggacgacgcctgccctcaaatac
ccgcgcaaggacatgatcaagcaggcagagctccacgaagagctggtccctgtccgcatc
gaagtcgaatgggacaagtacaagctgcgcgatacttttacctggaacctccacgaccgc
ctcctccccgtcgagctcttcgccgcccagcttgtcgaagacattggcgtgaaaccgcct
gccgcccagcctgtctttgagcagattgtaagccagatgcgcgaacagctcaccgacttt
tatccctttgtcttttccgaagaagacgctctcgatcccgagctgccctactcggcatat
aaaaatgacgaaatgagaatactagtcaaactcaacatcaccatcggcccgcacaccctg
gtcgaccaattcgaatgggaaatcaacaacccctccaactcgcccgaagagttcgccgcc
aacatggcccgcgacctctctctctcaggcgagttcactacagccattgcacactgcatc
cgcgagcagtcgcaactattcacaaagagcctgtacagcgtcggccactcctttgacggc
cggccgatcgaagactcggaccttgtgtcggccttcctgcagacgcccgtgccggccgtc
ttccgaccccagcagcaggccaaggagtacgccccatacatgtacgagatgagcgatgcc
gacctcgaccgcaacgagaccatcttctcgcgcgagcagcgacggcagaagcgctccatc
aaccggcgcggcgggccgcagcttcccgacctgcgcgagcggcagcgcacgatccgcacc
ctcatggtctcgtcggtgctgccgggtgccgccgaaaccattgaggagacaggccttttc
aagcgcgcggcgggcatccgcaagcggccgacgcgcgagggcgacatttccgagtcggac
gagagcgacgactcggcgcccgactcgcccgcaccctcgcagtttgccggcaccgcccgc
acgcgcggcatgcgcggcgccgcgtcggccgcccagcaccgcatgtccaacctcgggcgc
tccgagacaccagatgccctacaccacgaggcgagcgccggcggtgtcggcgggcgctcc
tcgcgccgcttccgcgaggagaccgaggacgtgccgcgcctcgtcgtcacgctcaaggtc
aacaaggataagtttcggcggctgctgcgcggcgagtatcgcttctcccatacgacgcct
tcgcagccgccgacgccttcgcaaggtggcgccacgcccaaggtgctcgccaaggcgatg
ccacctacctcgacgccatcgcgcggcatcagcaccacgcccgtgccgattccccacgtg
gtgggcaagtttccgcctggccagattggtcgcctgccagcgcctcctcccgtaccaggc
caacagcacactccgcccaacccgcccgagtggctcgtccaggcccttcggggcctcgag
aagaagtaccccgacggcgaccggttcgaggctataatgaagtactcgtacctcgacccc
atcacggagctgcccgtccagatacaccccctccccgacggcgtcaagtatgcctggctc
ccgcgcatccgctgcctcgactgcacctccaagctctacacgcccggcccggacatgacg
gcgcaaaaattcgagacgcacctgcgcttctccagccaccgcgaggcggtccgcgcccgc
gtggtcgccgacggcggcggcggcggtggcggccgcagcggctcgagcgcgtcctcgtag
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