Chlamydia muridarum Nigg: TC_0694
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Entry
TC_0694 CDS
T00028
Symbol
pmpB_C-1
Name
(GenBank) polymorphic membrane protein B/C family
Organism
cmu
Chlamydia muridarum Nigg
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AAF39510
UniProt:
Q9PJY2
LinkDB
All DBs
Position
828157..833175
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AA seq
1672 aa
AA seq
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MSSMKWLSATAVFAAVLPSVSGFCFPESKELNFSRTGTSSSTTFTETIGENGTEYIVSGN
SSFTNFTNIPVKKPTTDDSSTSTPTTSSAVDPTEKIVRASSSSSPNSGDTSATPDPKGGG
AFYNEHSGILSFMARSGVEGSLTLSNIKMTGDGGAIYSQGELLFTDLTGLTIQGNLSQLS
GGGIFGGSTISFSGINQATFSSNTAEVVPEETTPNPNPGTQTTTSQPSPTSKVQSLFTYS
SSTQANGNGADSQTPSHKPGSGGAIYATGDLTISDSQEIVFSVNKASKDGGAIFAEKNVS
FENITTLKVQNNGAEEKGGGIYASGDLSIQSSKQSLFNSNTSKQGGGALYIEGNVDFKDL
EEIRIKYNKSGTFETKKVTLSLPEAQTNKSSVTAASQSGPNTTPTPTPPVTAKGGGLYTE
KNLSISNITGIIEITNNKATDVGGGAYVKGTLTCKDSHRLQFQKNSSEKKGGGLYTEDTI
TLSNLTGKTLFQENTAKEEGGGLYIQGDDKTLTMTGLDSFCLIDNTSATHGGGAYVTKEI
SQTYTSDVEEFPGITPVHGETIISGNKATGGSGGGVCTKHLVLSNLQTISISENFASENG
GGACTCPDNFPAPTASTPSTNQTAAPKDDKDFLIDYVVSTTIDKNKATKKGAGVYAKKAK
LSRIDELNISDNAAQETGGGFCCTESLELDTIASLSVTKNLAGKEGGGLHAKTLNISNLK
SGLSFSNNTANSSSTGVATTATTSQSPTVSSFLPRATAGSSPAPAQTTPTYAGVVGGAIY
GETVSFSKCSGLCQFTENSAIDNTPSSPSLNVQGGAIYAKTSLSIEAEDPSTSYVFSKNS
VSTGKAQTTGQIAGGAIYSPSVTLNCQTVFSGNSASMATTNPPSGTSPKDTIGGAIAGTT
ISLSKTSHFSENTADLGAAIGTLSGGSSSNLTEKITLSNGSFTFEKNKANKRGVIYAPSV
SIKGNNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTAEQASSTATGGQTTNTT
NYGAAIFGDPGTQTTDTTLKLIASSGNITFSNNSQNTATNNPATKFCSISGYVKLTLQAA
QGKTISFFDSIRTSTKKTGQAQNSYETLDINKTENSNTYAGTVLFSSELHEVKSYVPQNV
VLHNGTLVLKKNAELHVVSFEQKEGSKLIMEPGAVLSNQNIANGALAINGLTIDLSSLGA
PQTGEVFSPPELRIVATTSNSGGGGGVGGYVTASKNLSAASPTVAATNPTMADNKVFLTG
ALTLIDPDGNFYQNPILGTDLTDVPLIKLPTTANQVDVSNLTLSGDLSPKKGYTGTWTLN
PDPQTGKVVANWKFDMYRRWEYIPRDNHFYANSILGSQNSMIVVKQGLINNMLHNARFDD
AAYNNFWVSGVGTFLSQQGTPLSEEFSYYSRGTSVAIDAKPRPDFILGAAFSKMVGRTKA
IKKVHNYSHKGSEYSYQASVYGGKFLYFLLNKQHGWALPFLLQGVVSYGHIKHDTTTLYP
SIHEKNKGDWEDLGWLVDLRVSMDVKEPSKRSSKRVALYGELEYSSIRQKSFTEIDYDPR
RFDDCAYRNLSIPMGCYFEGAIMSYDILMYNKLSLAYMPSIYRNNPVCKYWVLSSNETSK
VVCGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTLAQMTSCGARMIF
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtctatgaaatggctgtcagctactgctgtgtttgctgctgttcttccttcagtc
tcagggttttgtttcccggaatctaaagaattgaatttctctcgcacaggaacctcttct
tctactacttttacagaaactattggagagaacggtacagaatatattgtctctggtaac
tcgtcatttactaatttcactaatattccagtcaaaaaaccaacgactgatgactcaagt
acgtcaacccctaccacatcctctgctgtagatccaacagaaaagattgtcagggcctct
tcttcatcttcgcctaattctggggatacgtcagctactcccgatcctaaaggtggcgga
gctttttacaatgaacactccggaattttatcttttatggcaagatctggagtagaaggt
tctctcactctatctaatatcaagatgaccggtgatggaggagctatctattcccaaggc
gaacttctatttacagatctaactggtttaaccatccaaggaaatctatcccaattatct
ggaggaggaatctttggaggctctactatttcattctctggaatcaatcaagccacattc
tcatccaatactgcagaagttgtccctgaagaaactacaccgaacccaaatccaggaact
caaacaacaacctcacaaccatcacccacttccaaggtccaaagtctattcacttactct
tcatctactcaagctaatggaaacggtgcagattctcaaactccatcccataaaccggga
tctggaggagctatctatgccacaggagatttaaccatttccgactctcaagagatcgtt
ttctccgtaaacaaagctagtaaagatggaggagccatctttgcagaaaaaaatgtttct
ttcgagaatatcacaacactaaaagtacaaaacaatggagcagaggaaaaaggaggcggt
atctatgctagtggagatctgtccattcagtcctctaaacaaagcctttttaattccaat
accagcaagcaaggaggcggagctctttatattgaagggaatgtagacttcaaagatctc
gaagaaattcgcattaagtacaataaatcaggaactttcgaaacaaagaaagttacttta
tcgttacccgaagcccagacaaataaaagctctgtaactgctgcttcccagtctggaccc
aatactacaccaactcctactcctccagtcacggctaaaggtggaggtttatacaccgaa
aaaaatctttccatctctaatattacagggattattgaaattactaacaataaagcaacg
gatgttggaggaggagcttacgtaaaaggaacactcacttgcaaagattctcatcgctta
caatttcagaaaaactcttccgagaaaaaaggaggaggactttacacagaagatacgatt
accttatctaacctgacaggtaaaactctattccaagagaataccgctaaagaggaaggt
gggggtctttacatccaaggagatgacaaaactttaaccatgacaggactcgatagcttc
tgtctgatcgataacacttcagcaacccatggtggtggagcctacgtcactaaagagatt
tctcaaacttatacttccgacgttgaagagttccctggaatcactcctgtgcatggagaa
acaatcatctcggggaataaagctactggtggtagtggtggtggagtatgcacaaagcat
cttgttttgtccaatctccaaaccatctctatatccgaaaattttgcatcagaaaatggt
ggtggtgcctgtacatgtccagataatttccctgctcctacagcatctactccttctacc
aatcaaactgccgcccctaaagacgataaagactttttaatcgattatgttgttagcaca
acgatcgacaagaataaggcaacaaaaaaaggtgccggtgtctatgctaaaaaagctaaa
ctatcccgcatagacgaactcaatatctccgataacgctgctcaagaaacaggaggtggc
ttctgctgtacggaatctttagaattggataccatcgcctctctatccgtaactaaaaat
cttgctgggaaagaaggtggaggactccacgctaaaacattaaacatttctaatttaaaa
tcaggattatctttctcaaacaacacagcgaactcttcttctacaggagttgcaacgacc
gcaactacatcacaatcccctacagtttcctcattcttacctcgagctactgcaggaagt
tctccagctcctgcgcaaacaactccaacttatgccggagtagtaggtggagctatttac
ggagaaacggtttccttctccaaatgtagcggactgtgtcaatttacagagaactctgct
attgataatactccttctagcccctcgctaaatgttcaaggaggagctatttatgccaaa
acatcgttatccatagaggcagaagatcctagtacctcttatgtcttctctaaaaactct
gtctctacagggaaagcgcaaacaaccggtcaaatagctggaggagctatctactctcct
tcagtcacattaaactgtcaaacagtattttccggtaatagcgcctctatggcaacaaca
aatcccccctccggaacctcgccaaaagatactattggtggagctattgcaggaaccaca
atctccttatctaaaacttctcatttttcggaaaatactgctgatttgggagctgctata
ggaaccttgtcaggagggtcttcatccaatcttacggaaaaaattaccttatcgaacgga
tcatttacctttgaaaaaaacaaagcgaataaacgcggagttatctatgctcctagcgtt
tccattaaagggaacaatattacctttaaccaaaacacatctactcatgacggaagtgcg
atctactttactaaggatgcaacaattgagtctttaggatctgttctttttacaggaaac
aatgtgactgcagaacaggctagctcaacagcaactggaggacaaaccacaaatactaca
aattatggcgcggctatctttggagatcctggtactcaaactactgacaccacattaaaa
ctgatcgcttcctccgggaatattactttcagtaataacagccaaaatactgccacaaat
aaccctgccactaagttctgtagtatctcaggatacgttaagctcactttacaagcagca
caagggaaaacgatcagcttttttgacagcatccgaacttccaccaagaaaacaggtcaa
gcacaaaatagttacgaaactttagatatcaataaaacagaaaacagtaatacgtatgct
gggactgtgttattctcttccgagctccacgaagtgaaatcctatgtgccacaaaacgta
gttctccataacgggacattagttcttaaaaagaatgcagagctgcatgtagtctctttt
gaacagaaagaaggctccaaattgatcatggaacccggagcagtgttatctaaccaaaat
atagctaacggagcgttggctattaatggattaaccattgacttatccagtttaggagct
ccacaaacgggagaagtcttctcccctcctgaattacgaattgttgcaacaacttctaac
tctggaggaggtggtggagttggaggttatgtcacagcctccaaaaatctctccgcagca
tcccctaccgttgcagctacaaatccaaccatggcagacaacaaagtcttcttaaccggc
gctctgactttgatcgatccagatggaaacttttaccaaaatcctatcttagggacagat
ttaaccgatgtaccgttaatcaaactccctacaacagcaaatcaagttgatgtttctaac
ttaacactatccggagacctttctcctaagaaagggtatacaggaacctggacgctaaat
cctgatccacaaacaggaaaagttgttgccaactggaaattcgacatgtaccgccgttgg
gaatacataccaagagataaccatttctatgccaattcgatcttgggctcccaaaactcc
atgattgttgtgaaacaagggcttattaataacatgttacataatgcccgtttcgatgac
gctgcttacaacaacttctgggtctcaggagttggaactttcctatcgcaacaaggtact
cctctttctgaagagtttagttattatagccgaggaacttctgtagctatcgatgcaaaa
ccacgaccagattttatcctgggagctgcttttagtaagatggtaggaagaactaaagcg
attaagaaggtacataattattcccataagggatccgaatactcataccaagcctctgtt
tacggaggtaagttcctgtacttcttacttaataaacaacatggctgggcactacccttc
ttattacaaggggtcgtatcctatgggcatattaagcatgatacaacaaccctctatcct
tctatccatgaaaaaaataaaggagactgggaagatctgggttggttagtagatctacgc
gtctctatggatgttaaagaaccttccaagagatcttctaaacgcgttgctctttacgga
gaacttgagtactccagcattcgtcagaaatcattcacggaaattgactacgatcctcga
cgctttgatgattgtgcttacagaaacctatcgattcctatgggctgctattttgaaggg
gctatcatgagttatgatattctcatgtataacaagctttccttagcctatatgccatct
atttacagaaataaccctgtctgtaaatattgggtcctatcttcgaatgaaactagcaaa
gttgtctgtggagtccccacaagaacatccgctcgagcagagtatagtacacaactttat
ctagggcccttctggaccttatatgggaattacaccatagacgtgggtatgtacacattg
gcacaaatgacgagttgtggtgcccgtatgattttctaa
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