Campylobacter mucosalis: CMCT_0465
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Entry
CMCT_0465 CDS
T06923
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cmuc
Campylobacter mucosalis
Pathway
cmuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMCT_0465 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmuc03021
]
CMCT_0465 (rpoC)
03400 DNA repair and recombination proteins [BR:
cmuc03400
]
CMCT_0465 (rpoC)
Enzymes [BR:
cmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMCT_0465 (rpoC)
Transcription machinery [BR:
cmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMCT_0465 (rpoC)
DNA repair and recombination proteins [BR:
cmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMCT_0465 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QKF62626
LinkDB
All DBs
Position
454466..458971
Genome browser
AA seq
1501 aa
AA seq
DB search
MNNLKPVEIKEEQRPRDFEAFQLRLASPERIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTSSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGIKMKDLERVLYYEAYIVENPGSAFYDNENSKKVEKYDVLNEEQYQLLAQR
YENEGFVARMGGEVIYDMLAELDLFKILEDLKAEIEATNSEAKKKTIVKRLKVIESFLNS
GNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNSRLKRLLELDAPEI
IIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPKLRMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEVWE
CLEEVVKDHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHV
PLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLERTDEKGANKIFASV
DEVMIAEEAHSLGLHAKIKTILEGHTITTTAGRLILRSIIPDFVPENLWNKVMKKKDISS
LVDYVYKNGGLEVTAEFLDKLKNLGFRYATKAGISISIADIIVPDNKQKHIDDAKKKVRE
IQKQYGGGLLTDSERYNKIVDIWTDTNNTVASEMMKLIQSDKGGFNSIYMMADSGARGSA
AQIRQLAGMRGLMAKPDGSIIETPIVSNFREGLNIMEYFNSTHGARKGLADTALKTANAG
YLTRKLIDVAQNVKVSMHDCGTHEGVEITEITESGELIESLEERVLGRVLADDVIDPITN
EILFSEGTLIDEEKARVLSESGIKAVSIRTPITCKAPKGVCAKCYGINLGEGKLVKPGEA
VGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVVATKEGFIRYYNLNTYENNGKIVV
ANRRSAAVLLVEPKIKSPVDGKIEIEVAHEDIILTIKGKKEEFKYIVRRNDVAKPNELAG
VSGKIEGKMYIPYSNGDDVKEHESIVEVIKEGWNVPNRIPFASELKIADGEPVTQKIVAS
ANGVAKFFILKGDYLERIKDVKNGHKVEQKGLFVVVSDQGGREAIRHYIPRGSIVQIDDN
ANVDTKSVIALPEKSDKLVIAEWDPYSTPIIAEEAGVVAFEDIEPGYSVAEQFDEATGQS
RLVVNEYLPSGVKPTIVIATKTGTIRYQLEPKTAIFVSDGTSVAQADILAKTPKAVAKSK
DITGGLPRVSELFEARKPKNTAIVAEIDGVVRFDKPLRSKERVIIEAEDGSSAEYLIDKT
RQIQVRNGEFVHAGEKLTDGLISSHDILRILGEKALHYYLISEIQQVYRRQGVAIADKHI
EIIVSQMLRQVKIVDSGNTNFIVGDLISRNRFKEENERIMKMGGEPAIAEPILLGVTRAA
IGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGLYKDKTIKIKK
L
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctaaaaccagttgagataaaagaggagcaaagacctcgtgattttgaagcg
tttcagcttcgtcttgcaagtcctgaaaggataaagtcgtggagttatggtgaggttaaa
aagcctgaaactataaactaccgcacactaaaacctgagcgtgacggtttgttttgtgct
aaaatttttggtcctattcgtgactatgagtgtctttgtggcaaatacaaaaaaatgcgt
tataagggcattaaatgcgaaaaatgtggtgttgaggttactagttcaaaagttcgtcgc
tctcgtatggggcacattgagcttgttacgccagtagctcacatttggtatgtaaattca
ctaccttcacgtatcggcacacttcttggcataaaaatgaaagatttagagcgtgtgctt
tactatgaggcatatattgttgaaaatcctggcagtgctttttatgacaatgaaaattct
aaaaaggttgaaaaatacgacgttttaaacgaagagcagtatcaacttttagcacaaaga
tatgaaaatgagggctttgttgctagaatgggtggcgaagttatctatgatatgcttgct
gagcttgatttgtttaaaattttagaagatttaaaagcagaaatagaggctacaaattct
gaagccaaaaagaaaactattgtaaaacgcctaaaggtcattgagagctttttaaattca
ggaaatcgtccagagtggatgatgattacaaatttgccagttttaccgccggatttaaga
ccacttgttagccttgacggtggaaaatttgcagtttcagatgtaaatgatttatatcgt
cgtgtgataaatagaaatagtcgtttaaagcgtcttttagagcttgatgcacctgagatt
attataagaaacgaaaaacgtatgcttcaggaagccgttgatgctttatttgataatggt
cgccgtgcaaatgccgtaaaaggtgcaaataaacgtccacttaaatcactttcagagatt
atcaaaggcaaacagggtcgtttccgccaaaacctactaggtaagcgtgtggatttctct
ggtcgttcggttattgttgttggtccaaagcttagaatggatcagtgcggtctgcctaaa
aagatggcgttagagctatttaaaccacaccttttagcgcgtcttgaagagaaaggttat
gcaacgaccgttaaacaagccaaaaagatgattgaagataagacaaatgaagtttgggag
tgccttgaagaggtagttaaagatcatccggttatgctaaaccgtgctccaacgcttcac
aagctttcaattcaagcgtttcacccggtactagttgagggtaaggctattcagcttcat
ccgctagtttgtgccgcatttaacgctgactttgacggcgaccaaatggctgttcacgtg
ccattatcacaagaagcaattgctgagtgtaaaattttaatgcttagctcaatgaatatc
cttttaccagcaagtggtaaggctataactgtgcctagccaggatatggttttaggaatt
tactatttaagcttagagcgaaccgatgagaaaggtgcaaataaaattttcgcctcagtt
gatgaggttatgatagcagaagaggctcactcactaggacttcacgctaagattaaaaca
atccttgaagggcacacgataacaacaaccgctggtcgtttgatactgcgttctatcatt
cctgattttgttcctgaaaatttatggaataaagttatgaagaaaaaggatatctcgtca
cttgttgattatgtttataaaaatggcggtcttgaagtaacggctgagtttttagataag
cttaaaaatttaggtttccgctatgctacaaaggctggaatttcaatatctattgctgat
atcatcgtgcctgataataaacaaaaacatattgatgacgctaagaaaaaggtgcgtgaa
attcaaaagcaatatggtggtggtttgctaacagactctgagagatacaacaaaatcgtt
gatatttggacagatacaaacaacaccgttgctagtgagatgatgaaacttatacaaagc
gataagggtggatttaactctatttatatgatggctgactctggtgctaggggctcagca
gctcaaattcgccaacttgctggtatgcgtggtcttatggcaaaacctgacggctctatt
attgaaacaccaatcgtttcaaacttccgtgagggactgaatataatggagtattttaac
tcgactcacggtgctagaaagggtctagctgataccgctttaaagacggcaaacgctggt
tatctaactcgtaagctaattgacgttgctcaaaacgtaaaggtgtctatgcacgattgt
ggcactcatgagggtgttgagattactgagattactgagagtggcgaacttattgagagc
cttgaagagcgtgtattaggtagagttttagctgatgacgttattgatccaataacaaat
gaaattttatttagtgaaggcacattgattgatgaagaaaaggcaagagtgcttagcgag
agtggcataaaagctgtaagcataagaacccctattacttgcaaagcaccaaaaggcgtt
tgtgccaagtgctatggtataaacctcggcgagggcaaacttgttaagcctggcgaagct
gttggtattatctcggctcagtcaattggggaaccaggaactcagctaacactaagaaca
ttccacatcggtggaacagcttcaacagagcaacaagatcgccaagttgtagctacaaaa
gagggttttatacgttactacaacctaaacacttatgaaaataacggcaaaatagtagtc
gcaaaccgccgaagtgctgctgtgcttttggttgagccaaagattaaatctccagtagac
ggaaagattgagattgaagtagctcacgaagatattatccttaccataaaaggcaaaaaa
gaggaatttaaatatatcgttcgtagaaatgacgtagctaaaccaaatgagttagccggc
gtaagtggaaagatagaaggtaaaatgtatataccttactcaaatggcgacgatgttaaa
gagcacgaaagtatagtagaggtcatcaaagagggctggaacgtgccaaatcgtatccca
tttgccagtgagctaaaaatagctgacggagagcctgtcacacaaaaaatcgtggctagt
gcaaatggggttgcaaaattctttatcctaaagggtgactatttagagcgtataaaagat
gttaaaaacggacataaagtagagcaaaaaggtctatttgtggtagtctcagatcaaggt
ggtcgtgaagctatacgccactatataccaagaggctcgattgttcagatagatgataat
gcaaatgttgatactaagagcgttatagcacttcctgaaaagagcgataagctagtaatt
gcagagtgggatccatactcaactcctataattgcagaggaagctggtgttgtggcgttt
gaagatattgagcctggatatagtgtggctgagcagtttgatgaagctactggtcagagc
cgtttggttgtaaatgagtatctgccaagtggcgtaaaacctacgattgtaatagcgaca
aaaacaggaactatcaggtatcagcttgagcctaaaacagctatatttgtaagtgacggc
acaagtgttgctcaggctgacattttggcaaaaactccaaaagcagttgcaaaatcaaaa
gatattactggcggtcttccaagggtatctgagttgtttgaagcaagaaagcctaaaaat
acggctattgtagctgaaattgacggcgttgttagatttgataagccacttcgctcaaaa
gagcgtgttattatcgaagctgaagatggctctagtgctgagtatttgattgacaaaacg
cgtcaaattcaggtaagaaacggcgagtttgtccacgctggagagaagctaacagacgga
cttatttcaagccacgatattttaagaattctaggcgagaaagcacttcactattaccta
attagcgaaattcagcaagtttatcgccgccaaggtgttgctattgccgataaacatatt
gagattatcgtatctcaaatgctaaggcaggttaaaatcgttgatagtggtaatacaaat
ttcatcgttggcgatcttatatctagaaatagatttaaagaagaaaatgagcgaattatg
aaaatgggcggagaaccagcgattgctgagcctatacttttaggtgttactcgcgcggct
atcggctctgatagcgttatctcagcggcatcgttccaagagacgacaaaggttctaacc
gaagcttcgatagcggctaaatttgactatcttgaggatctaaaagaaaacgtaatctta
ggtcgtatgatacctgttggaaccggtctttataaagataaaactatcaagattaaaaaa
ctctaa
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