Chelonia mydas (green sea turtle): 102937788
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Entry
102937788 CDS
T02989
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy02010
ABC transporters
cmy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102937788 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102937788 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmy02000
]
102937788 (ABCA1)
Transporters [BR:
cmy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102937788 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102937788
NCBI-ProteinID:
XP_037758251
LinkDB
All DBs
Position
5:complement(129270123..129406196)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFNRSIISRLFSDAKRLLLYSQKDS
SLKDVQKLLGKLQKLGNSGSGLKLQDFLVDNETFSDFLHHNVSMPLFAVDEILNAEVNLQ
QVILSGYRMQLRDLCNGSELSEFLTIHNPVVAVVSEAFLCTMPKEKLHTAEQAFRANIDL
LKPILKGIASNYSLQDLSGAMETLVESLGTLVKELVSMKSWSDMRQEVIFLTNVNSTSSS
TQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAANFYDNSTTPYCNE
LLKNLESSPLSRIIWRALKPLLIGKILYTPDTPVTRRVMAEVNRTFQELGVFRDLGGMWE
EIGSKIWTFMESSQEMDLIRTLLKSEGLWDTHLNGSNWTVQDVSLFLAKSPEDVQPVNGS
TYTWMDAFNETDQAVQTISRFMECVNLDKLEPVATEVRLINRSMELLDERRFWAGIVFPE
ISPNSVELPPHIKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDVV
EQAIIRALTGTEKKTGVYVQQMPYPCYVDDIFLRVMGRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGTLWFSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTMFSRANLATACGGIIYFTLYLPYVLCVAWQDYVSFSLKMFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNLFESPLEEDGFNLTISAFMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKTYWFGEESEERRHARSDHKGPSEHCMEEEPIHLSLGVS
IQNLVKIYRDGKKVAVDGLTLNFFEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSEEKVKEEMQQMVLDVG
LPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGRLCCIGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSVISNLIMKHVPEARLVEEIG
HELTYILPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNGVDAET
SDGTLPARRNRRVFGDRQSCLHPFTEDDAFDPNDSDIDPAESRETDLLSGVDGKGSYQMK
GWKLIRQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPDDAGTQKLVNALVNEPGFGTRCVEGHSIPDTPCLVREDKWTTAS
VPDAVLDIFLNGNWTMENPSPACECSNEKIKKMLPVCPPGAGGLPLPQREQNTGDILQNL
TGRNVSDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSVGASSSLLFPPSDEVSDAIKQVKK
ILELAKGSSGDQFLHSLGSFMKGMDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLQD
SENPSTYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPALAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
EILKSVFLVFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
AVFFLITVLIQYRFFIKARPVSAKLSPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQGVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCQVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGSPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPNLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDMSLHKNQTVVDIAILTSFLRDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggattgctgctatggaagaacttcacatacaggcgaagg
cagacatttcagctgctgattgaagttgcttggcctctctttatcttctttatactgatc
tccgtacgcctttcatatccgccctacgaacaacatgaatgtcactttccaaacaaggcc
atgccttcagcgggaaccttgccctggatccaagggattatctgtaatgccaacaaccct
tgcttccgctacccaacgcctggggaatccccaggtgttgttggaaacttcaacaggtcc
atcatttcccgcttgttctcggatgccaagaggttactcttgtacagccagaaggacagc
agcttaaaggatgttcagaaactcctgggaaaactgcagaagctcgggaactctggctca
ggtttgaaacttcaggatttcctggttgacaatgagaccttctcagactttctccatcat
aatgtttccatgccattgtttgctgtggatgagatactgaatgcagaggtcaacctccag
caggtcatcctgtctggctatcgaatgcagctgagagatctgtgcaatgggtcagagctg
tctgaattccttacaatccacaacccagtagtcgcagtggtcagcgaagccttcctctgc
accatgcctaaggaaaaactccacacagcagaacaagcctttcgtgctaatatagacctt
ttgaagcctatactgaagggaatcgcctccaattactccttacaggatctgtcaggagcc
atggagaccttggtggagagtcttgggacgctcgttaaagagctggtgagcatgaagagc
tggagtgacatgaggcaggaggtgatatttctgaccaatgtgaactccacaagctcctcc
acccagatctaccaggcggtgtcgcggatcgtgtgtggccatccggagggaggagggttg
aaaatcaaatctctcaactggtacgaggacaacaactacaaagccctgtttggaggcaac
agcaccgaggaggatgcagcgaatttctatgataattctacaacaccctattgcaatgag
ctgctgaagaatcttgaatccagtccgctttcccgaattatttggagggctctgaagcct
ttgcttattgggaagatcctgtacactcctgacaccccggtcacgaggagggtcatggct
gaggtgaacaggactttccaggagctgggcgtgttccgggacctaggagggatgtgggag
gagataggctcgaagatttggacgttcatggaaagcagccaggaaatggatctgatccgg
acgctgctgaagagcgaaggcctctgggacactcacttgaacggctcaaactggacggtt
caagatgtttccctgttcttggcaaagtccccagaggacgttcagccagtgaatggctcc
acatacacctggatggatgccttcaatgagactgaccaggctgtccaaaccatctcccgc
ttcatggagtgtgtcaacctggacaaactggagcccgtggccacagaagtgcggctcata
aacaggtccatggagctcctggatgagaggaggttctgggctggcattgtcttccctgaa
atctccccaaacagtgtagagctgcctcctcacatcaagtacaagatacggatggacata
gacaatgtggaaaggacaaacaagattaaggatgggtactgggaccccggtcctcgtgct
gacccctttgaagacatgcggtatgtctggggcggcttcgtgtatttgcaggatgttgtg
gagcaggcgatcatcagggcgctgacgggcacggagaagaagactggtgtctatgtacag
cagatgccctacccctgttacgtggatgatatattcctgcgtgtcatgggccgttccatg
cccctcttcatgactctggcctggatctactcggtggctgtaataatcaaggggattgtg
tacgagaaggaagcccggctgaaggagaccatgagaatcatgggcctggacaatggcacc
ctctggttcagctggttcatcagcagcctcatccccctcctcatgagcgctgggcttctg
gtgctgatcctgaagatgggaaacctgctgccctatagcgaccccagtgtggtgtttgtc
ttcctctccgtctttgccgtggtgaccatcttgcagtgcttcctcatcagcaccatgttc
tccagggccaacctggcaacagcctgtggggggatcatctatttcaccctctacctgccc
tacgtgctgtgtgtcgcctggcaggactacgtgagcttctcactgaaaatgttcgcgagc
ctgctgtccccggtcgcctttgggtttggctgcgagtactttgcattgtttgaggagcag
ggggttggcgtgcagtgggacaacctctttgaaagccccctggaagaagatggcttcaac
ctcaccatatctgccttcatgatgttgtttgataccttcctctatggggttatgacctgg
tacattgagtctgtcttcccaggccagtatggaattcccaggccctggtacttccccttt
acaaagacttattggttcggcgaggaatctgaggagaggcggcatgctcgttctgatcac
aaagggccgtcggagcactgcatggaggaggaacccattcatctaagcctgggggtctcc
attcagaacctggtgaagatttatcgtgatggcaagaaggttgctgtggatgggcttaca
cttaatttctttgaagggcagatcacatcctttctgggacataatggagctgggaaaacc
acaaccatgtccatcttaactggtttatttcctccgacctcgggcacagccttcatcctg
ggcaaagatatccgctccgagctcagcaccatcaggcagaacttgggcgtctgtccccag
cacaatgtcctctttgacttgctgactgtggaagagcacatctggttctacgcacgtctg
aaagggctgtcagaagaaaaggtgaaagaggagatgcagcagatggtgctggatgtcggc
ctgcctcacaaactcaaagctagaaccagcaaactctctggtggcatgcagagaaagctg
tcggtggccttggcctttgtgggtggatcaaaggttgtcattctggacgagccaacagct
ggggtggatccttactctcgccgagggatatgggaactgcttctgaagtatcgccaaggc
cgcaccatcattctgtccacacatcacatggatgaggcagacatcctaggggacaggatc
gccatcatttctcatggcagactgtgctgcattggctcttccctgttcctgaaaaaccag
ctgggaacaggctattacctgaccctggtcaagaaggacgtggactcttcactgagctcc
tgcagaaacagcagcagtacggtgtcgtacctgaaaaaggacgacagtgtctcccagagc
agctcggatgctgggcttggcagtgaccatgaaagtgacaccttgacaatagacgtctct
gttatctccaacctcattatgaagcatgttcctgaggccaggctggtagaggagattggc
catgagttaacttacatcttgccatatgaagctgctagagaaggagcttttgtggagctg
ttccatgagatcgacgaccgtctctctgacctgggcatttcgagttacggcatctcggag
actaccctggaggagatctttctcaaagtggctgaagacaatggggtggatgcggagacc
tcagatggcacattacctgcaagaaggaacaggcgtgtctttggagacagacagagctgc
cttcatccgttcacagaagatgatgctttcgaccctaatgattcagatatagatccagca
gaatccagagagacagacctgctcagtggggtggatggcaaaggctcctaccagatgaag
ggctggaagctcatccggcagcagttcgtagctctgctgtggaagaggctgctcattgcc
aagcgcagcaggaagggtttcttcgcccagatcgtgctgccagctgtgtttgtgtgcatt
gctctcatgttcagcctgatcgtacctccctttgggaaataccccagcctggaactgcag
ccctggatgtatgatgagcagtacacttttatcagcaacgacgccccagacgatgcaggc
actcagaagcttgtgaacgcccttgtcaatgaacccggctttgggacccgctgtgtggaa
ggacactccattccagacactccttgcctggtcagagaggataaatggaccaccgcctct
gtccccgacgcggtcctggacatcttcctgaacggcaactggaccatggagaacccctcc
ccggcctgcgaatgcagcaatgagaagatcaagaaaatgctccctgtgtgcccacctggc
gccggggggctgcctcttccacagagagaacagaacactggcgacatcctgcagaacctg
acgggccggaacgtatcggactatctggtgaagacctacgcgcagatcattgggaaaagt
ttaaggaacaagatctgggtgaatgagttcaggtatggtgggttttcagtgggcgccagc
agttccctcctgtttcctcccagcgatgaagtcagtgatgccatcaagcaagtgaagaaa
atcttggagctagccaaggggagttctggagatcagtttcttcacagcttgggaagcttc
atgaaagggatggacacaaaaaacaacgtgaaggtttggttcaataacaaaggctggcat
gccattggctccttcctgaatgtgatcaacaatgccatcctccgggccaaccttcaggac
agcgagaatcccagcacctatgggatcactgcgttcaaccacccgctgaacctcaccaag
cagcagctctccgaggtcgccctgatgaccacgtcggtggacgttttagtctccatctgt
gtgatcttcgccatgtcctttgtcccagccagctttgtggttttcttgatccaggagcgg
gtcagcaaggccaagcacctgcagttcatcagcggggtgaagccggtgatctactggctg
gctaacttcgtctgggatatgtgcaactatatagttccagccaccttggttatcatcatc
ttcatctgcttccaacagaagtcctacgtgtcctcttccaacctgcctgcgctggccctt
ctcctcctgctctatgggtggtctataacgccactcatgtacccagcttcctttgtgttc
aagatccccagcacagcctacgtggtgctgaccagcgtgaatctcttcattggcataaat
ggcagcgtggccactttcgtcctcgagctcttcaccaacaacaagctgaacaacatcaat
gaaatcctgaagtctgtcttcctcgtcttcccccacttctgcctggggcggggactgatc
gacatggtgaaaaatcaggccatggccgacgctttggaaaggtttggcgagaaccgtttt
gtgtcccctctgtcctgggatctggtgggacggaacctctttgccatggctgtggaaggg
gcagtcttcttccttatcacagtgctcatccagtacaggttcttcatcaaagcgaggcct
gtcagtgccaagttgtctcctgtgaatgatgaggatgaggatgtgaccagggagaggcag
aggataattagtggtggcggacagagtgacatccttgaaatcaaagagctgaccaagatt
tatagaatgaagagaaaaccagctgttgaccggatctgtgttggaatccctcctggggag
tgctttggcctcctgggagtgaatggtgctggcaagtcgtcaactttcaagatgctaact
ggagatacagatgtgacgggaggagaagcttttctgaagggaaacagtatcttatctaac
atccaaggagtccatcagaacatgggctattgccctcagtttgatgctattaatgagctg
ttgacagggagagaacatctggagttctttgcacttttacggggtgttcctgagaaagag
gtctgccaggttggcgaatgggcaattcgtaaactgggccttgtgaaatatggagaaaaa
tatgctgggaactacagcggagggaacagacgcaagctctccactgctattgccctgatt
gggagccctccggtggtgttcctggatgagccaaccacgggaatggatcccaaagcacgc
cgtttcttatggaactgtgctctgagcatcatcaaggaggggagatcagtggtgcttaca
tctcacagcatggaagaatgcgaagccctgtgcactcgaatggcaataatggtcaacggg
cggttcaggtgtcttggcagtgtccagcatctgaagaacaggtttggagatggttataca
atagtagtgcgaatagcaggggcaaaccctaacctgaagcccgttcaggaattctttggg
cttgcctttcctggcagcgtcctgaaggagaagcatcggaacatgctgcagtaccagctc
ccatcctcaccatcctctctggccaggatatttagcatcctctcccagaacaaaaaaaga
ctccacatagaagactactccgtttctcagactacacttgatcaagtgtttgtaaacttt
gccaaggaccaaagcgatgatgaccacacaaaggacatgtcattgcacaaaaaccagact
gttgtggacattgcaatccttacttcctttctgcgagatgagaaggtgaaagaaagttgc
gtgtga
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integrated database retrieval system
