Cryptococcus neoformans var. neoformans B-3501A: CNBI2530
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Entry
CNBI2530 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb04120
Ubiquitin mediated proteolysis
cnb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CNBI2530
04120 Ubiquitin mediated proteolysis
CNBI2530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnb04121
]
CNBI2530
Enzymes [BR:
cnb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CNBI2530
Ubiquitin system [BR:
cnb04121
]
Ubiquitin ligases (E3)
U-box type E3
CNBI2530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
4938213
NCBI-ProteinID:
XP_773408
LinkDB
All DBs
Position
9:complement(714934..719326)
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AA seq
1175 aa
AA seq
DB search
MSRCCRRASQYEASPIKCLNCLLITLSPVFLPTMADNSNLSDADKIRLKRLARLGTSTPI
PSQTQPQQQPSSSSTPEPHHPPSASSRLLANLPPAASPTSSSPAIVSPKPSASTKPDPQA
VQPKLSVTPSLSLKRPSSASTPRDEPVGPRIVHTKPIQPLVKTEYKAWETEKVGQVFAVT
LSKQKAQETDWSLCWLKDLEQELNEENYPSPLRTDIELADRLLIARLSMDPTLMAQSDDP
DALTILAGLPQNETVFEYLAGCWKRLYQASRDANRYAFSEDEKSQWGKSMDKIKGLVVSY
CGMTIEDPTMFPQPAEKPLGPAEFLPLLLSVHQPSSGDLLMSTPSVPTPLSGPLQPNDLL
PFLQDLAAGFDDDTLKDVISPTLSLFFQEWFKITPTPDIMGAEWRRYLGAMNLLVQVKHI
AAFLPTLPIWVAPNVTAPKLEWQSLLGPLTRLSVFPREFPEIWKTYFSNPTERKKEDIDA
NKSNLRFTLGSLHSSLFNVYNAIVRASPDAREGILDFFTLALRLNEKRAGMRVDPRTVSS
DGYMTNLQVVLLKLFEPVMDARFSKIDKVDPAYYKSSKRIDISEETKIKGAKEEADEYFG
SSMDVDTKPNFISDLFFLLNSYLHLGVVKTISTRIRAEKNLSEIEKELKRVEASTGDWAN
NATLQAQGEATIKKLKSDMSVLHASIHAYDTQLLDRDMIRMVVSFLSFVMTWLIRLVDPN
HQYPASPLNLPLPKEAPMAFRMLPEFFIENIAEYFEFLAKYDPDALDDVDKDIFITFAIT
FLSPNYVNNPFLKAKLVTIISYGLYPMGYWRHGPLFDRLSILSVATDHLMPTLIRFFIDV
EITGGHTQFWDKFNFRRDIGHIFKAMWTNPLHREAFVKSRHDDFDQFIRFVNMLMSDTTF
HLEESLTGLAKIGQIESQKANTASWEALPQSEREDLDGQLRQTEGSVPWHTQMGLSNVKL
IRDFTATTREPFVAPEIVDRLAASLDENLTALVGPKMSDLKVSNPDKYYFKPKDLLAAIA
QIYLNLSVESEFIRAVANDGRSYSKDLFMKFARTLKNRAIMTEGEVAEVISFTQKIEDMK
ATISMEDEREIPDEFLDPLLSTLMKDPVILPVSRVTIDRGTIRTVLLSKEVDPFNNVPLK
YEDCIPDTELKAKIDAWLAESNAKQADSVMDVDQL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgttgttgccgccgcgcaagtcaatacgaagcgtcacccataaagtgcttgaac
tgcttacttattactctctcccctgtcttcctccccaccatggctgacaactcaaacctt
tcagacgctgacaagatccgtctcaagcgtctcgcccgcctcggcacctccacccccatc
ccctcgcagacccagccacagcaacagccctcgtccagcagtactcccgagcctcatcac
ccaccctccgcctcctcaagacttcttgcaaaccttcctcccgctgctagtcccacatcc
tcctcccccgctattgtgtccccaaaaccctctgcttctaccaaacctgaccctcaagcc
gtccaacccaagctttccgtcacccccagtctttctctcaagagaccatcatctgctagt
acccccagagatgaaccggtgggtccgagaattgtgcataccaagccaatccagccactt
gtcaagacggaatacaaggcatgggagaccgagaaggttgggcaagtattcgctgttaca
ctaagtaagcagaaggctcaggaaaccgattggtccctttgttggctcaaagatctagaa
caggagctcaatgaagaaaactatccttctccgctcaggaccgatatagagctagctgat
agacttctcattgcccgtctctccatggaccccacgcttatggctcagtccgatgatccc
gatgcccttacgattcttgcaggactacctcagaatgagactgtctttgaataccttgct
gggtgttggaagaggttgtaccaagccagtagggacgccaaccggtatgccttctccgaa
gacgaaaagagtcaatggggcaaatcaatggataagatcaaggggctggttgtctcatat
tgtggtatgacgatcgaggaccctaccatgttccctcaaccagcagagaaaccgcttggg
ccggccgaatttctcccgcttctcctttcagttcatcaaccgtcatccggtgatcttctc
atgtctaccccttccgtcccgacgccgctatctggtccccttcagcccaacgacttgtta
cctttcctccaggacctcgctgccggttttgacgatgatactttaaaagatgtcatcagc
ccgacactgagtctattcttccaagagtggttcaagatcactcctaccccggatatcatg
ggtgcggagtggaggagatacctcggtgctatgaacttgttggtacaagtcaaacatata
gccgcgtttctgcccactttacctatttgggtggcgccaaatgtgacagctccaaaactc
gaatggcaatcgcttttaggtccccttacacgtctgagtgttttccctagagaattccct
gaaatttggaagacttacttttctaaccctaccgaaaggaagaaggaagacattgacgcg
aacaaaagcaaccttcgatttaccctcggaagcctacattcatccctgtttaacgtctac
aatgccatcgtccgtgcatcaccagatgccagagagggtattcttgactttttcacactt
gctttgcgtctcaacgagaagcgtgcgggaatgcgagttgaccctcgaaccgtctcctca
gacggctacatgacgaatcttcaggtcgtgctgctgaaactgtttgagccggtaatggac
gccagattctccaaaattgacaaagttgatccagcatattataaatcctcgaaaaggatc
gatatctcagaagagacaaagattaagggcgccaaggaagaggcggatgaatattttgga
agctccatggatgtggacacgaaaccaaacttcatctccgacttgtttttccttctcaat
agctatctccatcttggtgtagtcaagactatctcaactaggattcgagctgaaaaaaat
ctgagtgaaatagaaaaggaactgaagagagttgaggcatccacaggcgattgggcaaat
aatgcgacattacaagcacagggcgaagcaacaattaaaaagttgaagagcgacatgtct
gttcttcatgcttctattcacgcctacgacacgcagcttttggatcgagatatgattaga
atggttgtctccttcctcagctttgttatgacatggctcatccgccttgtcgacccaaac
caccagtacccagcgtcgcctcttaatttaccgttaccaaaagaagctccaatggctttt
aggatgttgccagaatttttcatcgaaaacatcgcagagtactttgagttcctcgccaaa
tatgatcccgatgcgcttgatgatgtagataaggacatctttattacctttgccatcact
tttctttctcccaactacgttaataaccctttcctcaaagctaaacttgtcacgattatc
tcatatggcctgtatcccatgggctactggcgccatggtcctctctttgacagacttagt
atactcagcgtggccacagaccacttgatgccaactttgatccgtttcttcatcgatgtg
gagatcactggaggtcatacgcaattctgggacaagttcaactttaggcgcgacattggc
cacatcttcaaagccatgtggacaaaccctctccaccgggaagcatttgtcaagtctaga
catgatgactttgatcagtttattcgctttgtcaacatgctcatgagcgatactacattc
cacctcgaagagtccttgaccggtttggccaagattggacaaatagagtctcaaaaagcc
aacactgcttcgtgggaagcattgccccagtcagagcgggaggatctcgatggtcagttg
aggcagacggagggtagtgtcccatggcacacgcagatgggcttatcaaatgtcaaattg
attcgagactttacggcaaccacacgagagccatttgttgctcccgagattgttgaccgt
ttggcagcatccttggatgagaaccttacagctctcgttggcccaaagatgtcggatctt
aaagtatccaaccccgacaaatactacttcaagcctaaggaccttttagcagctattgct
caaatctacctcaatctttccgtcgaatctgaattcatccgtgctgtcgccaatgatggt
agaagttattcaaaggatctgtttatgaagttcgctaggactttgaagaacagagccatc
atgactgaaggagaggtagccgaggttatcagctttacgcaaaaaatagaagacatgaaa
gcgacaatatcaatggaggacgagagggagattccggacgagtttttggatccattgttg
tcgactttaatgaaagatcctgtcatcttaccagtatctcgagtgaccattgatagaggc
accattcgaactgtcttgctttcaaaggaagtcgaccctttcaacaacgtgccgctgaag
tacgaggattgcattcccgacacagagctaaaggccaagatcgatgcgtggctggcggag
agcaacgcaaaacaagcggactcggtgatggatgttgatcagctgtag
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integrated database retrieval system
