Cupriavidus necator N-1: CNE_1c22830
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Entry
CNE_1c22830 CDS
T01564
Symbol
rpoS
Name
(GenBank) DNA-directed RNA polymerase sigma-38 subunit RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cnc
Cupriavidus necator N-1
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnc03021
]
CNE_1c22830 (rpoS)
Transcription machinery [BR:
cnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNE_1c22830 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
KORA
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEI77616
UniProt:
G0F0I7
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All DBs
Position
1:complement(2362925..2364103)
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AA seq
392 aa
AA seq
DB search
MPRQKTVSSGTVSRARRPKQPEVKAGVAHPDARADAEGFEPDLAAELIPVTDEPIATSAS
VGLREADLLADDNERIVRDDEEDESEDEEEESAENGTDGAAPEHDDFRTVLHTELAADTV
QHYLNRISIKPLLSAPEELHFSTLAKDGDFAARQVMIERNLRLVVSIAKGYLNRGVPLLD
LIEEGNLGLMHAIEKFDPSRGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQV
LRAKRHLEKGGTDGRDASLEDIAHLLGKTPDEVQDVLALNEHTTSLDTPFDLDPGSSLLD
FLSDEHNAAPDQEVAHRELEGLMKLWLARLSEKHRYVVERRFGLNHIEPATLEELAEEMG
LTRERVRQIQQEALVKLKRHFASQGVRKDAVL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagaaaactgtctcctccggaaccgtcagcagggctcgccgtcccaagcag
ccggaagtgaaggctggtgtggcacatcccgacgcgcgcgccgatgccgaaggcttcgag
cctgatctcgccgccgaactgattcccgtgaccgacgagcccatcgccacgtccgcttcg
gtgggcctgcgcgaggccgacctgctcgccgacgacaacgagcgcatcgtgcgcgacgac
gaagaggacgagtcggaagacgaggaagaagagagcgcggaaaatggcaccgacggcgcc
gcccccgagcatgatgatttccgcaccgtgctgcataccgagctggccgcggataccgtc
cagcactacctgaaccgcatcagcatcaagccgctcttgtccgcgccggaagaactgcat
ttctccacgctggccaaggacggcgactttgccgcgcgccaggtcatgatcgagcgcaac
ctgcggctggtggtcagcatcgccaagggctacctcaatcgcggcgtgccgctgctcgac
ctgatcgaggaaggcaacctgggcctgatgcacgcgattgaaaaattcgatccgtcgcgc
ggtttccgcttctcgacgtacgcgacctggtggatccgccagagcatcgagcgcgccatc
atgaaccaggcgcgcacggtccgcctgccggttcacgtgatccgcgaactcaaccaggtg
ctgcgcgccaagcgccatctggagaagggcggcaccgacgggcgcgacgccagcctggaa
gacatcgcccacctgctgggcaagacgccggacgaagtgcaggacgtcttggcactcaac
gaacataccacctcgctcgatacgccgttcgatctcgatcccggctcgagcctcctggat
ttcctctccgacgagcacaacgccgcccccgaccaggaggtggcccaccgcgagctggaa
gggctgatgaagctctggctggcgcgcctgtcggaaaagcatcgctatgtggtggagcgc
cgcttcggcctcaaccatatcgagcccgccacgctggaagagctcgccgaggaaatgggc
ctcacgcgcgagcgcgtgcgccagatccagcaggaggcgctggtcaagctcaagcggcat
ttcgcttcgcaaggtgtcaggaaggacgccgttctatga
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