Cryptococcus neoformans var. neoformans JEC21: CND04530
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Entry
CND04530 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CND04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CND04530
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CND04530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
3257118
NCBI-ProteinID:
XP_570104
UniProt:
Q5KI18
LinkDB
All DBs
Position
4:complement(join(1245155..1245973,1246026..1246081,1246135..1246216,1246267..1246573,1246623..1246714,1246763..1246905,1246958..1247125,1247177..1247975,1248019..1248392,1248450..1248600))
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AA seq
996 aa
AA seq
DB search
MSASRPKSSRVIQKPRGISALAARIPTSESTKQQSNVGGKRKAPTPATRKGTRPASPISV
ASTVLSVSDNDEDDEDELEEVPIPIVSNEVQGGDEDEDEQDGEDEESEDDDGVIHLEIGG
ETAEEKAKRMVLAKRKKPLTARDRALRLEVHKVHVIALLASASVRNKWCNNSLLKARLLS
LLPHPLQAAFNIPPSRFPDRAQRSRLFFEALQSLVTWWSQTFFDVSDYALGLRTRPWDEV
QGIIESISKVHTPFSRSPSGHGDGEKINKAASKGKGKAAASEELSEQLAFGSGAERLRSV
NSLMKKALQQEGSRDVSAQLFVALARACGLGVRLVTSLQAVPWRAEKGATKKKAVGAGRG
GRTLASRQGLGDEDEDDDEDEMEEVRIPDDVGRSVGGAKNNSREAGSRRLKDPADLYRLR
KYKPPARKIGSPTKSKPKASQSLADQPPVFWAEVFNRSDQRWIPVDPVRGIIRKKRDYEP
PTDSGPVRMLYVVAFEEDGYARDVTLRYTKNFYAKTSKLRVPAKPNEPQWWSDIVMGFLR
RPYHLNRDDMEDAELEMSQMTEGMPMHMSGFKDHPIYVLERHLKRDQVLNTANPVGRFKG
EAVFRRSSVQNCKTAENWMRSGRKIKEGQEPLKWVKQRAVTLQKRRAQELAKQEGEEVTQ
GLYAEWQTEIYRPPPIRDGIIPRNSFGNIDLYAPTMLPLGAVHLPYKGIAKVAKGLGVSY
AEACTGFEFKKQRAVPIIKGIVVAAEKKQEVLDAYEESTIAAEERERMKREDRALKRWSK
LVNGLRLRLRLQQEYGSKDKVNETPSNLFEGAGDEGEMRINLRGKSARELLAAAQHQSTK
DWEERVRREDISMEEEDGMMPAMAVERESNQILLGDFRAPSSAISEVTNVTPSAETPRIM
LRFKNTSSPQSAAHAASESRSGLTSSQKRKAMISGTIEAVDDEQFEDPRTTKGDKTMALP
EPVASTTNMRTLRSTRARTREQMKANQAREDKIRQA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttccagaccgaaatcttcaagagtcattcaaaaaccacgaggaatatcagct
ctcgccgctaggatccccacttcagaatccacaaagcaacagtccaatgtcggtggcaaa
cgtaaagccccgactcctgcgacccgcaaaggcacccgacctgcctccccgatatcagtt
gcttcgacagttttatctgtgtcagataatgatgaggatgatgaagatgagctcgaagaa
gttcctatacctattgtttctaacgaagtccaaggcggtgacgaggacgaagacgaacaa
gatggtgaggatgaagagagtgaagatgacgatggcgtaattcatctggagattggtgga
gaaactgcggaagagaaggcaaagcgcatggttttggctaagaggaaaaaaccattgaca
gcaagagatagagcactgaggttagaggtccacaaagtgcatgttatagctctattggct
agtgccagcgtaaggaataagtggtgtaacaactccctcttaaaagcccgtttgctctct
ctactgccgcatccgctacaagcagctttcaacattcctccttcccgcttccctgatcgt
gcacaacgctctcgcctatttttcgaggctttacagtctctggtcacgtggtggtctcag
acatttttcgatgtgtcggactatgctctaggcttgcgaactcgtccttgggacgaagtc
caaggcattatagagtcaatatccaaagtacatactccctttagccggtcgccttcgggt
catggtgacggcgaaaagatcaataaagctgcaagcaagggaaaaggcaaagctgctgca
agtgaagaactgtcagagcaacttgcctttggatcgggtgcggagcgtcttcgatcggtc
aatagccttatgaagaaagcgttacagcaagaaggatctcgggatgtttctgctcaacta
tttgtagctcttgctcgggcatgtgggctaggtgtcagacttgttacctcacttcaggca
gtgccatggagagcagaaaagggtgcgactaagaagaaggctgtaggagctggtagagga
ggcagaacgttagcgagcaggcagggtttaggagatgaagatgaggatgacgacgaggat
gaaatggaagaagttcgcataccagatgacgtgggaagatccgtaggaggggctaagaat
aattcacgagaagctggcagtaggcgattgaaagatccagcagatctctatagactacga
aaatacaagcctccggctcgaaagattgggtcgccaactaaatccaagccgaaggcaagt
cagagccttgcggaccagccgcctgtcttttgggcagaagtgttcaatagatcggaccaa
cgttggatacctgtcgaccctgtgagaggcattatccgaaagaaacgcgactatgagccg
ccaacggacagcgggccggttagaatgctgtatgttgttgctttcgaggaagacggttac
gcccgagacgtgacccttcgatataccaaaaacttctatgctaaaaccagtaaattacga
gtccctgcgaaaccaaacgagcctcagtggtggagtgatatagttatgggtttcctacgg
agaccgtatcatttaaaccgagacgatatggaagatgcagagctcgagatgagtcagatg
acagagggtatgccaatgcatatgagtggcttcaaggatcacccaatttatgttcttgaa
cgccacctcaagcgggatcaagtgcttaacactgccaatcccgtaggtcgcttcaaaggt
gaagcagtttttcgtcgttcttcagttcagaactgtaaaacggctgagaactggatgcgt
tctgggcgcaaaataaaagaagggcaagagcccctgaagtgggtcaaacagagagccgtg
acgctacaaaagcgaagagcgcaggagctggcaaagcaggaaggcgaggaagtaactcaa
ggactgtatgcggagtggcaaacagagatttacaggcctccgcccattagagatggcata
ataccgagaaattcgtttggcaatattgacctctatgcaccaactatgctgcccctcggt
gcagtccatctaccttacaagggtattgccaaagttgccaaaggcctcggagtaagctat
gcagaagcttgcactggtttcgaattcaagaagcaacgagcggtgcctatcattaaaggc
atcgtagtagcagctgaaaagaaacaagaagtccttgatgcctacgaagaatctaccatc
gctgctgaagagcgcgaacgtatgaagcgggaagatcgcgctttgaaacgctggtccaag
cttgtcaacggtctcaggcttcgtctacgtcttcagcaagagtatggctcgaaggacaag
gtgaatgagacaccttcgaatcttttcgaaggagccggggatgagggcgaaatgcgaata
aatctccggggaaagagtgcaagagaacttttggcagctgcgcagcatcagagcaccaaa
gattgggaagagagagttcggagagaagatatcagcatggaggaggaggatggtatgatg
cctgccatggccgttgagcgcgagtcaaatcagattctactgggcgatttccgcgctcct
agtagtgccatttcggaagtcactaacgtcactccctcggcggaaacaccgaggatcatg
cttcgatttaaaaacacctcctctccacaatcagccgctcacgccgcttccgaaagtcga
agtggactcacttcttctcaaaagaggaaagcgatgatttcggggacgattgaagctgtt
gacgatgaacagtttgaggatccacggacaacaaaaggggacaaaacgatggcattaccg
gagcctgtggcgagtacgactaatatgcggacgttgaggagcacaagagcgaggacaaga
gagcaaatgaaggccaaccaggcaagggaggataaaatcagacaagcttag
DBGET
integrated database retrieval system
