Caldicellulosiruptor obsidiansis: COB47_1811
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Entry
COB47_1811 CDS
T01293
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K27000
RNA polymerase sigma-H factor
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cob03021
]
COB47_1811
Transcription machinery [BR:
cob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COB47_1811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_38
HTH_23
SMC_Nse1
Motif
Other DBs
NCBI-ProteinID:
ADL43087
UniProt:
D9TFW7
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All DBs
Position
complement(1950372..1951106)
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AA seq
244 aa
AA seq
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MSLKEALAIIYNYCDRFFFEFLTRLKNLRRHIALTLQKWLLNFKECPDEELVRYSREGIK
EATEELLCRYQNFVKAKCRMYFLIGADKEDIYQEGMIGLFKAVRDFDETKYPSFRLFAEM
CITRQMITAIKTASRQKHIPLNTYISLNKPVYEENDERTLIDTLADTFISDPEEVMITKE
ELENAINVITECLSPFEFKVLSLYLEGRSYQEIADMIHKDVKSIDNALQRVKKKIEKYLT
PADK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaagaagctttagcaataatatataattattgtgataggtttttctttgaa
ttcttaacaaggcttaaaaacttaaggaggcatattgccttgacattgcaaaaatggctt
ttgaattttaaagaatgtccagatgaggaattggtaagatattcaagagaaggaataaag
gaagcaactgaagaacttctttgtagatatcaaaattttgtaaaggcaaagtgtagaatg
tactttttgattggagctgacaaggaggatatttatcaagaaggcatgataggtttgttt
aaagctgtgcgtgattttgatgagacaaaatatccttcgtttagattgtttgcagagatg
tgcattacgcggcagatgataactgcaatcaaaactgccagcaggcaaaaacatattcct
cttaacacttacatatcacttaacaagcctgtgtacgaagaaaatgacgaaaggacactt
attgacactttagcagacacattcatttctgaccctgaagaggttatgattacaaaggag
gagcttgaaaacgctataaatgttattactgaatgtctttctccttttgagttcaaggtt
ttgagcctttacctggaaggaaggagttatcaagagattgctgatatgatccacaaggat
gtaaagtcaatcgacaatgctcttcaaagggttaaaaagaagattgaaaagtacttgact
ccagccgacaaatga
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