Cohnella candidum: EAV92_10625
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Entry
EAV92_10625 CDS
T05696
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coh03009
]
EAV92_10625
Ribosome biogenesis [BR:
coh03009
]
Prokaryotic type
ribosomal protein modification factors
EAV92_10625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AYQ72976
UniProt:
A0A3G3JXK7
LinkDB
All DBs
Position
complement(2233873..2235816)
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AA seq
647 aa
AA seq
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MRDTIVIIGEGQLAELVNRQLEGSVSLVWRRDIPWNLPKSAKLCVTIGEEYRPDELEAAE
RKVRQFGIPWLSGRIVSGEGVVGPLARPDLPGCLSCAMTRIWNAGFDQDNRMALQLELMR
KGVIRRNRSVSRNGLVLMSRLIAEVARRGLQGKPSGGEDAVYIVDFATLGVTRHAFLPDP
LCSVCGEVPDDTSEAARILLKPNPKTDPGSYRAKPIEPLKQAMHRDYVDERTGLMKKLTP
DPDTPFSDVYVNVPTPAGVEVTVGRSHHYKQSELTAILEGLERICGTMPRGKRTCILDSY
ERLRDVALDPRTAGLYSDEQYAMPDFPFEPFDPTMKLRWVLAYSFLQERPVLVPEQFVYY
SSGIGGSFVDEGSNGCALGGSLEEAILYGLLELAERDAFLLSWYARLPLPRLDPGSVPDT
ELQLMVQRMEKVAGYRLFLLNGTMEHGIPSIIAVAKNTKKTGANLICAAGAHLDPIRAAK
SAIFELAGHTHYLDALLEQNREEYAEMAENPDLVSEMPDHALSYTVPEAEARVSFWLDPE
RPVQRFSDVFAPRERRTDVTDDLRDSIERFRRLNMDVLAVDQSTVETRRNGLFCAKVIVP
GLLPMTFGHQLRRVSGLERVLKVPMELGYRDRPLTPSELNPYPHPFL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggatacgatcgtgatcatcggggaaggacagctggccgagctcgtaaaccggcaa
ctcgaaggttcggtctctttggtgtggagaagggatattccgtggaatctgccgaaatcg
gcgaagctttgcgtgacgatcggcgaggaataccggcccgacgagcttgaagcggcggaa
cggaaggttcggcaattcggcattccgtggttgagcggaaggatcgtttccggagaaggc
gtcgtaggaccgctcgcccggccggaccttcctggctgtttgtcgtgtgcgatgacccgg
atatggaatgcggggttcgatcaggacaaccggatggcgctgcagcttgaactgatgagg
aaaggggttattaggcggaatcgatcggtgtcgcgaaacgggcttgtcctgatgagtcgc
ctgattgccgaggttgcgcgaagaggcctgcaagggaagccgtctgggggggaggatgcg
gtttatatcgtcgatttcgccacgctgggcgtgaccaggcatgcctttctaccggaccct
ctgtgctccgtttgcggagaagtgccggatgacacctcggaagcggcacgtatcttattg
aagccgaatccgaaaacggatcccggctcctaccgggcgaagccgatcgaaccgctcaag
caggctatgcatcgggattatgtcgacgaacgcaccggattgatgaaaaagctgacgccg
gatccggatactccgttcagcgacgtgtacgtcaacgttccgactcccgccggggttgag
gtgacggtgggtcgctcccatcattacaaacaaagcgaactcaccgccatattggagggg
ctggaacgaatctgcggcaccatgccgcggggcaaacggacttgcattctcgactcatac
gagcgtctacgggacgtcgcgctcgatcccaggacggcagggctgtattccgacgaacaa
tacgcgatgcccgattttccgttcgaacccttcgatccgacgatgaagctccgatgggtg
ttggcttattcctttcttcaggagcggcccgttctggttccggagcagttcgtttattac
agctcgggaatcgggggctctttcgtcgacgaaggatccaacggctgcgcgctcggaggc
agcctggaggaagcgatcctgtacggcttgctggagcttgcggagcgcgatgctttcctg
ttgtcctggtacgcaaggctgccccttccccgtctcgaccccggttccgtgccggacacg
gagctgcaattgatggttcagcgaatggagaaagtagcggggtaccgcttatttctactg
aatggcacgatggagcatggcattccaagcatcatcgccgtggccaagaacacgaagaag
acgggcgccaacttgatctgcgccgccggtgcacatttggatccgatcagggcggcgaag
agcgcgattttcgaacttgccggccatacccattacctggatgccttgttggaacagaat
cgcgaggaatacgcagaaatggccgaaaatcccgatctcgtcagcgaaatgcccgatcat
gccttgtcctacacggtgccggaagctgaggcgcgggtgtcgttttggctggacccggag
aggccggtacaacgattttccgacgtattcgccccccgggagaggcgcacggatgttacg
gacgacttgcgcgattcgatcgagcgtttccggcgattgaacatggacgtcctcgcggtg
gaccaatcgacggtcgaaacgagacggaacggcttgttctgcgcgaaagtgatcgtcccc
ggcttgcttcccatgacgttcgggcatcagcttagacgggtgtccggactggaacgggtg
ctgaaggttccgatggaactgggctaccgggatcgaccgctcacgccttccgagttgaat
ccctacccgcatccgtttctctga
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