Cohnella abietis: KCTCHS21_54550
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Entry
KCTCHS21_54550 CDS
T05979
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cohn03021
]
KCTCHS21_54550
Transcription machinery [BR:
cohn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KCTCHS21_54550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_23
HTH_38
HTH_29
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBI36056
UniProt:
A0A3T1DD31
LinkDB
All DBs
Position
complement(6157152..6157802)
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AA seq
216 aa
AA seq
DB search
MSVDLERLATREYDFKADEDIVEFVRTGDSEALEYLIHKYRNFVRAKARSYFLIGAERED
IVQEGMIGLYKAIRDFKSDKLASFKAFAEICITRQIITAIKTATRQKHIPLNSYVSLDKP
IYDEDSDRTLLDVICGSRVCDPEEMIINQEEFYGLEDKMSEILSDLERKVLMLYLDGRSY
QEIAVDLDRHVKSIDNALQRVKRKLERYLEARDLAQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgacttggagagactggcaacgcgtgaatacgacttcaaggccgacgaggac
atcgtagagttcgttcgcacgggtgacagtgaagcgttggagtatcttattcataaatat
cgaaatttcgtgcgggcgaaagcgcgctcttattttctaataggtgctgagcgagaagat
attgtgcaagaaggaatgatcggcttatacaaagcgatccgtgacttcaaaagcgataag
ctagcttcatttaaggcttttgctgagatatgcattactcgtcagatcattactgcaatt
aaaactgccactaggcagaagcatattccgctcaattcctatgtttctttggacaagccg
atctatgacgaggactctgatcgaacattgctcgatgttatctgcggttcaagagtatgt
gatccggaggaaatgattattaaccaagaggagttttacggcctcgaggataagatgtct
gaaatcttgagcgatttagaacgcaaggtacttatgctatacctggacggacgctcttat
caggaaattgccgttgatctcgacaggcacgtgaagtcaattgataacgctttgcaacga
gtgaagcgtaagcttgagcggtatcttgaggcacgcgaccttgctcaataa
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