Campylobacter ornithocola: CORN_1286
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Entry
CORN_1286 CDS
T06736
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
coj
Campylobacter ornithocola
Pathway
coj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORN_1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coj03019
]
CORN_1286
Messenger RNA biogenesis [BR:
coj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CORN_1286
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
KhpA-B_KH
MurD-like_N
dUTPase
Motif
Other DBs
NCBI-ProteinID:
QKF57792
UniProt:
A0A6M8MTQ7
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All DBs
Position
1274721..1276274
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AA seq
517 aa
AA seq
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MIEILVALIAVFIGGGIGYIVAKKINDANFNIFLEQAKAKAKAIEYEAELTLKDAKNSVA
EAEFTAKKKFDEKIQKLQKEHSAKLEELNKKEQNLHYQEKLHEENKNKLLKEKQTIKTLQ
EENENLKQNYETKLGEVLKILEHSAGLTQEEAKNIVLQKIEENSRAEIAHIVRKYEEEAR
NEAKRKANFILAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNVKTLEMVLGVD
IIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRIQPAKIEEIHEKVCKEFEDNILEEG
QTIVMDLGLNQIHPEIVKLIGKLRYRASYGQNALAHSLEVAHLAGIIAAECGGDEKLARR
AGILHDIGKALTHEFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIESAAVCTA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKEGVKKAYAINAGREIRVIVNAKLVNDDE
SVLLAKEIAEEIQEKVQYPGEIKVNVIRELRAIDFAR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatattagttgcattaatagccgttttcataggcggagggattggatatata
gtcgccaaaaagattaatgatgcaaatttcaatatctttttagagcaagcaaaagcaaaa
gcaaaagctatcgaatacgaagctgaattaacactcaaagatgctaaaaactcggttgct
gaagctgaatttacagcgaagaaaaaatttgatgaaaaaattcaaaaactacaaaaagag
cattctgctaaactagaagaacttaacaaaaaagaacaaaatcttcattatcaagaaaaa
cttcacgaggaaaataaaaacaagcttttaaaagaaaagcaaactataaaaaccttgcaa
gaggaaaatgaaaatttaaaacaaaactatgaaacaaaacttggtgaagttttaaaaatc
cttgaacactcagctggtctcacacaagaagaagcaaaaaatatagtcctacagaaaata
gaagaaaattcaagagctgaaattgcacatattgttagaaaatatgaagaagaagctaga
aatgaagccaaaagaaaggctaattttattttagcacaggcaacttcaaggtttgcaggg
gaatttgccgctgaaagacttattaatgttgtcaatatcaaaaatgatgaactaaaaggg
cgtattataggtaaagaaggaagaaatgttaaaaccctagaaatggttttaggggttgat
attatcatcgatgatacacctggagcaattatagtaagttgttttaatctttatagacgt
gctattgctacaaaggtgattgagcttttggtagaagatggaagaatacaacctgcaaaa
atagaagaaattcatgaaaaagtttgtaaagaatttgaagataatattttggaagaaggg
caaactattgtaatggatctggggttaaatcaaatccatcctgaaatagtaaaactcata
ggaaaattaagatatagagcaagctatggacaaaatgctctggcacattctctagaagta
gcacatttagctggaatcatagcagctgaatgtggcggggatgaaaaacttgcacgaaga
gctgggattttacacgatataggcaaggctttaacacatgaatttgaaggctcgcatgta
gatttaggagctgagctttgcaaaagatacaaagagcatcctgtggtgattaatgcaatt
tatgctcaccatggccatgaagaagctacaagcatagaatcggctgcggtttgcacagca
gatacactaagcgctgcgcgtcctggcgcaagacgtgaggttttagaagcttttttaaaa
agagttagcgaacttgaagatatagcaaaaagcaaagaaggggttaaaaaagcctatgct
attaatgcgggtagagagattagggttattgttaatgcaaaattagtcaatgatgatgaa
tctgtgcttttagctaaagaaatagctgaagaaattcaagaaaaagtacaataccctggt
gaaataaaagtcaatgtcatcagagaacttagagctattgattttgcaagataa
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