Colwellia sp. Arc7-D: DBO93_05490
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Entry
DBO93_05490 CDS
T05422
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00330
Arginine and proline metabolism
cola00480
Glutathione metabolism
cola01100
Metabolic pathways
cola01110
Biosynthesis of secondary metabolites
cola04148
Efferocytosis
Module
cola_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DBO93_05490
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DBO93_05490
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DBO93_05490
Enzymes [BR:
cola01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DBO93_05490
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Ribosomal_L32e
BRX_N
Motif
Other DBs
NCBI-ProteinID:
AWB57061
UniProt:
A0A2S0UYR5
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Position
complement(1248864..1250093)
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AA seq
409 aa
AA seq
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MALSTQLKDFKIKVPAATVAANQSECFAYTQPSNQEVEQLAAQFGAPLMVLDCEAIRRQY
HALKNALPNVTLHFALKPLPLAAVVRTLLAEGASFDLATSGEVDLVASEGVPSERTIHTH
PIKRDSDIRDALAYGCTVFVVDNINELEKFIAYKDQAEILVRLSFRNKDAFADLSKKFGC
SPEMAIEIITYAQQLGIRIKGLSFHVGSQTASPIKYVDAINACAKVIAQVSELGLPALST
LDIGGGFPVPYSADVLPIDVFCAPINVALAQLPETMQILAEPGRFIVASCVTSVASVMGQ
SVREGKTWYYLDDGIYGSFSGLMFDEAAYPIDSAKQDGMRFDSVLAGPTCDSIDVVSESI
MLPKLNNGDLIISRMMGAYTLATATDFNFFKRAEVVVLNEQVHSQVLTG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctttatcaacacaattaaaagacttcaaaatcaaagtacctgcagcaacggttgcg
gctaaccaaagtgaatgctttgcttatacacaaccatctaatcaagaagttgaacaacta
gcagcacaatttggcgcgcctttaatggtacttgactgcgaagctattcgtcgccaatac
catgcacttaaaaacgcattacctaatgttaccctgcactttgcattaaaacctttgcca
ttagcggcagttgttcgcacattgctagctgaaggcgcgagctttgatttagccaccagc
ggagaagttgatttagttgcaagtgaaggcgtaccaagcgagcgcaccattcacacgcac
ccaattaagcgcgatagtgacattcgtgatgcattagcctacggctgcacagtatttgtg
gttgataacatcaacgaattagaaaaatttattgcttataaagaccaagcagaaatttta
gtacgtttaagctttcgcaataaagatgcctttgctgatttatctaaaaagtttggttgt
agcccagaaatggcaatcgaaattattacttacgcacaacaattaggcattcgtattaaa
ggtttatcgttccatgttggttcgcaaacagctagcccaattaagtatgttgatgcaatt
aacgcttgtgcaaaagttattgcgcaagttagtgagcttggcttgcctgcattgagcaca
ttagacattggtggtggatttccagtgccttacagcgctgatgtattgccaattgatgtg
ttttgcgcgccaattaatgttgcccttgcacaattgccagaaaccatgcaaatactagca
gagcctggccgctttattgttgcaagctgtgtaactagcgtggcatctgtcatgggtcaa
tctgtgcgtgaaggtaaaacatggtactacttagatgacggtatttacggctcgttcagt
ggcttaatgtttgatgaagcagcatacccaatcgacagtgcaaaacaagacggcatgcgt
tttgactcagtactagcaggcccaacatgcgacagtattgacgtagtaagcgaatcaatt
atgttacctaagctaaacaatggtgatttaattatcagtcgaatgatgggtgcatacact
ctagcgactgctaccgattttaacttcttcaaacgtgcagaagtagtggtattaaatgag
caagttcacagccaagtattaacgggctaa
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