Colwellia sp. Arc7-D: DBO93_07090
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Entry
DBO93_07090 CDS
T05422
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola03030
DNA replication
cola03430
Mismatch repair
cola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBO93_07090
03430 Mismatch repair
DBO93_07090
03440 Homologous recombination
DBO93_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cola03032
]
DBO93_07090
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_07090
Enzymes [BR:
cola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBO93_07090
DNA replication proteins [BR:
cola03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBO93_07090
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBO93_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWB57338
UniProt:
A0A2S0UZF7
LinkDB
All DBs
Position
1638469..1642023
Genome browser
AA seq
1184 aa
AA seq
DB search
MSETELTTITTTDPAPKNGNNPAFIHLRIHSDYSMSDGLKKVKPIVARAAELNMPAIALT
DQTNLCGLVKYYHAAHGAGLKPIIGCDFWVQSEALEGELSRLVVLTTNNIGYKNLTELIS
KAYLRGHVQGKAVIDRDWLIDHAEGLILLSGGREGDVGKALLKGNQEFVEDMVAFYQQYF
PNCFYLELIRTGRNDEENYIHLAVALAASHDLPVVATNEVMFLSPVDFDAHEIRVAIHDG
FTLDDKRRPKKYSKEQYLRTEEEMVALFADIPEALANSVEIAKRCNVTVRLGEYVLPDFP
TEGLSIEDYLVKVSEEGLQERLEFLFDKDAPDFAEKRKPYDERLAIELKVVNGMGFPGYF
LIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPD
FDIDFCMDRRDEVIDHVAELYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISK
LIPPTPGMTLAKAFEEEPKLPEIYAQDSDVKDLIDMCRILEGTTRNAGKHAGGVVISPTT
ITDFAPLYCDEEGKNPVTQFDKNDVEDAGLVKFDFLGLRTLTILQWAIEMADAKLLKEGK
EPIDLPAIDLEDKASFKVLLKSETTAVFQLESSGMKSLIAKLKPDCFEDIIALVALFRPG
PLQSGMVDNFIERKHGREAISYPDETWQHLDLKPILEPTYGIILYQEQVMQIAQVLAGYS
LGGADMLRRAMGKKKPEEMAKQRAGFEAGAVGRGVDGELAMKIFDLVEKFAGYGFNKSHS
AAYALVSYQTLWMKTHFPAPFMAAVMSADMDNTDKIVTLVDECSNMGLDLLPPDVNRGQY
KFTVNDDDQIIYGIGAVKGVGEGPIEAIIAARESDGEFIDLFDFCARVDLKKINKRVLEK
LIKSGAMDALGPNAKDGPHRAALFVSLPEALKAAEQHAKAQAIGQNDLFGLINEEPEDNR
QTYKEVPKWPEQQWLDGEKETLGLYLTGHPINRYLSEIKRYSTGRLVSLQPTNKDKTTVA
VGLVLGVRVLVNKRGRRWALVTLDDKSARMDIRLFPDDYDRFAELLISDAILVCSGQVSF
DDYSGGITMTARDIMTIADARENYVSSLDLQVDKNQLSGQFIEQFTKVLTPYKDGICPIR
VFYQRDEAQGMLELGVQWRVSPSDMLLYDLKTLLGDEQVELKFK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaccgagttaacaacaattaccacaactgatccagcgcctaaaaacggtaat
aatccagcgtttattcacttgcgaatacacagtgattattctatgtcagatggcttgaaa
aaagtgaagccaatcgtcgcccgagctgcagagctcaatatgcctgccatcgcactcacc
gatcaaacaaatttatgtgggctggttaagtattatcacgcggcacatggtgcaggttta
aagcctattattggttgtgatttttgggttcaaagtgaggctttagaaggtgaattgtcg
cgtttagtcgtattaaccaccaataatattggttataaaaatttaactgaattaatttct
aaagcttatttacgtggacatgttcagggtaaagctgtcattgatagagactggctcatt
gaccatgcagaaggcttaattttactttctggtggccgcgaaggcgacgtgggtaaagcg
ttgcttaaaggtaaccaagagtttgttgaagatatggtggcattttatcagcaatatttt
cccaactgcttttaccttgagttaattcgaacgggtcgaaatgacgaagaaaactatatt
caccttgccgtagcgcttgctgcgagtcatgacttgcctgttgttgccactaacgaagtt
atgttcttaagtcctgtagactttgatgcgcacgaaattcgtgtcgccattcatgatggt
tttactttagatgataaacgtcgcccaaaaaaatattctaaagagcaatacttgcgaacc
gaagaggaaatggtcgcactttttgctgatattcctgaagcacttgcgaattcggtagaa
atcgcaaaacgttgtaatgttactgtgcgtttaggcgaatatgtactacctgattttcct
accgaaggcttatcgatagaagattacttagttaaagtatcagaagaaggtttacaggaa
aggttagagtttttatttgataaagacgcgcctgactttgctgaaaaacgtaaaccttac
gatgaacgtttagcgattgaattaaaagttgttaatggtatgggcttccccggttatttc
ttgatcgtgatggagtttattcagtggagtaaagacaataatattcctgttggtcctggc
cgtggttcaggggcaggttcattggtggcttacgctcaaaaaattaccgatctcgaccca
ttggaatacgatctactttttgaacgattcttgaaccctgaacgtgtctcgatgcccgat
ttcgatatcgatttttgtatggacaggcgtgacgaagttattgatcacgttgcagagtta
tacggccgagatgctgtatcacaaatcattaccttcggtacaatggcagcgaaagcggtt
attcgagatgtaggtcgcgtgcttggtcacccgtacggttttgttgatcgcatttctaaa
cttatcccgccaacaccgggtatgaccttagctaaagcatttgaagaagagccaaagctg
cctgaaatttacgcccaagacagtgacgtaaaagatttgattgatatgtgccgtatttta
gaaggcacaacgcgaaatgcgggtaaacatgctggtggtgttgttatttctccaacaaca
atcaccgattttgctccgctttattgtgatgaagaaggtaaaaatccggtaacgcagttt
gataaaaatgatgtagaggatgccggattagtaaaatttgattttctcggtttacgtacc
ttaaccattttacagtgggccatagaaatggctgatgcaaaactgctaaaagagggtaaa
gaaccaatcgatttacctgcgattgatttggaagataaagccagttttaaagtgctatta
aaatcagaaacaactgcggttttccagcttgaatctagcggcatgaaatcactaatagca
aaactaaaacccgattgctttgaagatattatcgctttggtagcgctattcagacctggc
cctttacagtcaggcatggttgataactttatcgaacgtaaacatggtcgtgaggctatc
agttacccggatgaaacatggcaacatctcgatttaaagccaattcttgaacctacttac
ggtattattctttatcaagagcaggtaatgcaaatagcgcaggtgttagccggttactcg
cttggtggtgccgatatgttacgtcgtgccatgggtaagaaaaagcctgaagaaatggct
aagcaacgtgcaggctttgaagcaggcgctgttggtcgtggtgttgatggcgagctagcg
atgaaaatttttgacttggttgaaaagttcgccggttatggttttaacaaatcgcattct
gccgcttatgctttagtgtcgtatcaaactttgtggatgaaaacccactttcctgcgcca
tttatggcggcggttatgtctgctgatatggataataccgataaaattgtgacgttagtt
gatgagtgcagcaacatggggcttgatttattgccgcctgatgttaaccgagggcaatat
aagttcactgtgaatgatgacgatcaaattatttatggtatcggcgctgtaaagggcgtt
ggtgaaggtccgattgaagctattattgccgcgcgtgaaagcgatggtgagtttattgat
ttgtttgatttttgcgctcgggttgatttgaaaaagatcaataagcgtgtgttagagaaa
ttaattaaatctggtgcaatggatgcccttgggcccaatgctaaagacggtcctcatcgt
gcggctctatttgtgtcattacctgaagcattaaaagcagcagagcaacatgcaaaagct
caagccattgggcaaaatgatttatttggtttaataaatgaagaaccagaagataacaga
caaacatataaagaagtgccaaagtggcctgaacaacagtggttagatggcgaaaaagaa
actttaggtttatatttaacgggtcacccaatcaaccgttacttaagtgaaatcaaacgc
tattcaacgggacgtctagtcagcttgcagccaaccaataaagataagacaacggttgcc
gtaggcttagtgctaggtgtgcgggtattagtcaataaacgtggtcgtcgatgggctttg
gtcacattagatgataaaagtgcccgaatggacatccgcttatttccagatgactacgat
aggtttgcagaattgcttatttctgacgctattttggtctgtagcggacaggtcagcttt
gatgattactccggtggtattacaatgaccgctcgagacataatgactattgctgatgca
cgggaaaattatgtatcgtcgttagatttacaagtcgataaaaatcagctttcaggccaa
tttatcgaacagtttacaaaggtgctaacaccctataaagatggtatttgcccaattcgc
gttttttatcaaagagatgaagcgcaaggtatgctagagttaggggtacagtggcgcgta
tcgccaagcgacatgctattatacgatttgaaaacccttttgggtgatgagcaagtcgag
ttaaaatttaaataa
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