Colwellia sp. Arc7-D: DBO93_13470
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Entry
DBO93_13470 CDS
T05422
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DBO93_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_13470
Enzymes [BR:
cola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBO93_13470
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBO93_13470
RecFOR pathway proteins
DBO93_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
Rad17
AAA_14
AAA_3
nSTAND3
AAA_16
RNA_helicase
NTPase_1
AAA_18
AAA_17
NB-ARC
AAA_28
Sigma54_activ_2
AAA_24
TsaE
AAA_19
bpMoxR
TIP49
IstB_IS21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AWB58463
UniProt:
A0A2S0V2N1
LinkDB
All DBs
Position
complement(3101839..3102843)
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AA seq
334 aa
AA seq
DB search
MIEADRLIEPIASREDETVDRAIRPKMLSDYTGQQHVKSQMEIFIAAALKREEPLDHLLI
FGPPGLGKTTLANIVANEMGVSIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRDRFGIVQR
LEFYNTQELTEIVMRSAHFLNLDIAQAGAFEVARRSRGTPRIANRLLRRVRDYADVKTDG
IVSKATAASALDMLEVDNEGFDLMDRKLLEAIIDKFAGGPVGLDNIAAAIGEERETIEDV
LEPFLIQQGFLQRTPRGRIATSRAYLHFGLDFPS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagatcgattaattgaaccaatagcaagccgtgaagatgaaacggttgat
cgcgctattcgacctaaaatgctgtcagactataccgggcaacaacacgtaaagtcgcaa
atggaaattttcattgctgcggccttgaaaagagaagagccgcttgatcatttattaatt
tttggtcctccaggtttaggtaaaacaacgctagccaatattgttgcaaatgaaatgggc
gtaagtatccggacaacttcaggtcccgtgctggaaaaagccggagacttggctgcatta
ctgacgaatcttgaagaaaacgatgtcttgtttattgatgaaattcatcgtttaagtcca
gtagttgaagaaattttgtaccctgcaatggaagattatcaattagatattatgataggc
gagggacccgcagcacgttcaattaaacttgatttgcccccatttactttaataggtgct
acaactcgagcaggcgcactcacttcgccgttacgcgaccgatttggcatagttcaacgg
ctagaattctataatactcaagaactaacagaaattgtcatgcgctcagcacatttctta
aacttagatatcgcgcaggcaggcgcttttgaagttgcaaggcgctctcgtggtacacca
cgtattgctaatcgtttattgcgcagagttagagattacgcggatgtaaaaactgatggc
atagtaagtaaagcaacagcagctagtgccttagatatgttagaagtagataatgagggc
tttgatctaatggacagaaaactattagaagcaattattgataaatttgctggtggtccg
gtagggctcgataacattgccgcagccattggtgaagaacgtgaaactattgaagatgta
ttagagccttttcttattcaacaaggtttcttacaacgaacaccccgaggcagaattgcc
acaagtagagcttatttgcattttggtttagattttccaagctaa
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