Cellulophaga omnivescoria: PBN93_02335
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Entry
PBN93_02335 CDS
T08738
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
comn
Cellulophaga omnivescoria
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_02335
Enzymes [BR:
comn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PBN93_02335
DNA repair and recombination proteins [BR:
comn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PBN93_02335
Prokaryotic type
PBN93_02335
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Ortholog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WBU89867
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Position
complement(530870..532159)
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AA seq
429 aa
AA seq
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MSDKISVFWFRRDLRIEDNTALCNALKSGNSVLPVFIFDKNILNELDEDDARVTFIHKTL
SVINLALKEYNSSVLCLHTTPELAWKKIVSTYNVERVFFNKDYEPYARERDQKITSFLND
KSIEVKSYKDSVIFEEDDVLKNDGDPYTVYTPYKNKWLSKFTPDLIEDKKCDFKGKLLEF
NADFPSLENLGFSASNITVEPYNLEHLDVYAEKRDFPSDNITTYLGPHLRFGTVSVRKLI
RGLDGLESVFLSELVWREFFTQILFHFPKVVTQNFRSKYDGIKWRNNKDDFEKWCSGNTG
YPMVDAGMRQLNKTGYMHNRVRMITAGFLCKHLLIDWQWGEAYFAKKLLDYELASNNGNW
QWAAGTGCDAAPYFRIFNPITQLKKFDKDFKYVKHWIPELDGFNYPEPMVEHKAARERAL
KVYKEGIED
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaatttctgttttttggtttaggagagatttaagaattgaagacaatacg
gcactgtgtaatgcattaaaatctggtaattccgtacttcctgtttttatttttgataaa
aatattttaaatgaactagatgaagatgatgcaagagtaacgtttatacataaaacttta
tcggttataaatttagctttaaaagaatataatagtagtgtactatgcttgcatacaaca
ccagaacttgcttggaaaaaaatagtaagtacatacaatgtagagcgtgtttttttcaat
aaagactatgagccatatgcaagagaaagagatcagaaaataacttcatttttaaacgat
aaatctatagaggttaagtcttataaagacagtgttatttttgaagaggatgatgtttta
aagaatgacggtgatccctatacagtttatactccttataaaaataaatggctatctaaa
tttactccagacctaattgaagataagaaatgtgattttaaaggtaaattattagagttt
aatgcagactttccttcattagaaaatttaggatttagcgcatctaatataactgtagaa
ccatacaatttagagcatttagatgtttatgcagaaaaaagagattttccgtctgataat
ataacaacgtatttaggcccacacttgcgttttggaaccgtaagtgtacgcaaattaatt
agaggtttagatggtttagaaagtgtgtttttaagtgaattggtttggagagaatttttt
actcaaatcttatttcattttccaaaggttgttacccaaaattttagatctaagtacgat
ggtataaaatggcgtaacaataaagacgattttgaaaaatggtgttctggtaatactggt
tatcctatggtagatgctggtatgagacagttaaacaaaacaggttatatgcacaataga
gtgcgtatgattactgctggctttttatgtaagcatttattaatagattggcagtgggga
gaggcctattttgctaaaaagttgttagactatgagttggcctctaataatggcaattgg
caatgggcagcaggtactggttgtgatgctgctccgtattttagaatatttaaccctata
acacaattaaaaaagtttgataaagattttaaatatgtaaagcattggattcctgagttg
gatggttttaattatccggagccaatggtagagcataaagcagcccgagagagagcacta
aaagtctataaagaaggtatagaagattaa
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