Actibacterium sp. EMB200-NS6: TQ29_00245
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Entry
TQ29_00245 CDS
T04096
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
con
Actibacterium sp. EMB200-NS6
Pathway
con03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
con00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TQ29_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
con03400
]
TQ29_00245
DNA repair and recombination proteins [BR:
con03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TQ29_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ALG88882
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Position
complement(46712..49342)
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AA seq
876 aa
AA seq
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MMAQFMEIKEAHKDALLFYRMGDFYEMFFEDAVAAAEALDIALTKRGKHLGQDIPMCGVP
VHSAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGSKSVVKRGVVRLVTPGTLTEESLLEA
RRHNFLAAFAEVRDEAALAWVDISTGAFRVMTCPPVRLSPELARLGPREVVVSEAKEREL
AEIVSESGAALTPLARSAFDSTAAESRLTGLFGVGTLEAFGNFTRAEMSAMGAIVEYLDI
TQKGRLPLLRPPVREAASRTVQIDAATRRNLELTASLSGGRDGSLLSAIDRTVTAAGGRL
LERRVSSPSRDLPVIHARLDAVRFMTEQPRLAEALRGHLRKAPDMDRALSRLGLDRGGPR
DLSAIRNGLAQAAEVAADLAGAAAPALIAETAGALVGHDALLDLLDQALVADPPLLARDG
GFIAPGYNADLDEARTLRDEGRGVIARMQADYAALTGIQALKIKHNNVLGYFIETTATHA
ERMLSAPLSETFIHRQTTANAVRFTTVDLSEMETRILNAGGRALEIEKRLYESLKAAILE
NAAGIGQAAAALAEIDLATAFADLAQGENWCEPQVDESRAFLVERGRHPVVERALRRQGG
APFIANDCDLSAQDENAAIWLLTGPNMAGKSTFLRQNALIALLAQAGSFVPARKALIGLV
SQLFSRVGAADDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIAWA
TLEHLHDTNRCRALFATHYHEMTALAGKLDGVENATVAVKEWEGDVIFLHEVHKGAADRS
YGVQVAKLAGLPHAVVERARIVLDALEKGEREGGTGKKALIDDLPLFAASPAPAPKPAPN
AASAAEEKLAGIHPDELTPKEALNLIYELKALSAPD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcagttcatggaaatcaaggaggcgcacaaagacgcgcttctgttttaccgc
atgggcgatttctacgagatgttctttgaagatgcggtcgcggcggcagaggcgctggat
atcgcgctgaccaaacgcggcaagcatctgggccaggacatcccgatgtgcggcgtgccg
gttcactccgccgaggggtatctgctgacgctgatccgcaaaggttttcgcgttgccgtc
tgcgaacagatggaagacccggcggaggcgaaaaagcgggggtctaaatcggtggtgaaa
cgcggcgttgtccggctggtgacgcccggcacgctgacagaggaaagcctgctggaggcg
cggcgccacaactttctggccgctttcgccgaggtgcgcgacgaagcggcgctggcctgg
gtcgatatctccaccggcgcgttccgggtgatgacctgcccgccggtgcgcctgtcgccg
gaactggcccggctgggcccgcgcgaggtggtcgtttccgaagcgaaagagcgggaactg
gccgaaatagtctctgaatcaggggccgcgctgacgccgctggcccgatcggccttcgac
agtaccgccgcggaaagccggctgaccgggctgttcggtgtcggcacgctggaagctttc
ggaaacttcacccgcgccgagatgtcggcgatgggcgcgatcgtcgaatatctggacatc
acccagaaaggcaggttgccgcttttgcgcccgccggtgcgcgaggccgcgtcgcgcacc
gtacagatcgacgccgcgacccgccgcaacctggaactgacggcgagcctttcgggcggg
cgcgacggctcgcttctttcggcgatcgaccgcaccgtgaccgccgccggggggcggttg
ctggaacggcgcgtgtccagcccgtcgcgcgatctgccggtgatccacgcgcggctggac
gcggtacgtttcatgaccgaacaaccccggttggccgaggcgctgcgcgggcatctgcgc
aaggcgcccgacatggaccgcgccctttcacggctggggcttgatcggggcggcccgcgc
gatctgagcgccattcgcaacgggctggcccaggccgccgaggtggcggcggatctggcg
ggcgcggcggccccggcactgatcgcggaaacggccggggcgcttgtgggccacgacgcc
ctgctggatctgctggaccaggcgctggtcgccgatccgccgcttctggcgcgggacggc
ggctttatcgcgccgggatataacgccgatctggacgaggcccgcaccctgcgggacgaa
gggcgcggggtgattgcccggatgcaggcggactatgccgcgctcacgggtattcaggcg
ctgaagatcaagcataacaacgtgctgggctatttcatcgaaaccaccgccacccatgcc
gaacggatgctgtcggccccgctgtcagagaccttcatccaccggcagaccaccgccaat
gcggtgcggttcaccaccgtcgatctttccgagatggaaacaaggattctgaacgcgggc
gggcgggcgctggagatcgaaaagcggctctatgaaagcctgaaagcggctattctggaa
aatgcggccggcatcgggcaggccgctgccgcgctggccgagatcgaccttgccaccgct
ttcgccgatctggcgcagggcgaaaactggtgcgagccgcaggtcgacgaaagccgcgcc
tttctggtcgagcgcgggcggcacccggtcgtcgaacgcgcgctgcgccgtcagggcggc
gcgcccttcatcgccaatgactgcgatctgtcggcacaagacgagaacgccgcgatctgg
ctgctgacggggccgaacatggcgggtaaatcgaccttcctgcgccagaatgccctgatt
gccctgctggcgcaggcgggcagtttcgtgccggcgcgcaaggcccttatcgggcttgtt
tcacagctgttcagccgggtgggcgcggcggatgatctggcgcgcgggcgatcgaccttc
atggtggaaatggtggaaaccgccgcgatcctgaatcaggccgatgaccgggcgctggtc
atcctcgatgagatcgggcgcggcaccgccacctatgacgggctgtcgatcgcctgggcc
acgctggaacatctgcatgacaccaaccgctgccgcgccctgttcgccacccactaccac
gagatgaccgcgctggccggcaagctcgacggggtcgagaacgcgaccgtggcggtaaag
gagtgggagggcgatgtgatcttcctgcacgaggtgcacaaaggcgcggcggatcggtct
tacggtgtgcaggtggccaagctggccggattgccccatgcggtggtggaacgggcgcgg
atcgtgctggatgcgctggaaaagggcgagcgtgagggcggcaccggaaagaaggcgctg
attgacgatctgccgctgttcgcggccagcccggcccccgcgccgaaaccagcgccaaac
gcagcctcggcggccgaagaaaagctcgccgggatccatcccgacgagctgacgccgaaa
gaggcgctgaacctgatctatgagctcaaggcgctgagcgcccccgattaa
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