KEGG   Commensalibacter melissae AMU001: D9V35_01440
Entry
D9V35_01440       CDS       T05684                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
coq  Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:coq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:coq03021]
    D9V35_01440 (rpoH)
Transcription machinery [BR:coq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D9V35_01440 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 DUF6374 LysM GvpK HTH_25
Other DBs
NCBI-ProteinID: AYN86252
LinkDB
Position
complement(326829..327737)
AA seq 302 aa
MVPSMLDITPENNITQYIQNIRKFPLLTAEEEFTYAKQWKEEGNIQAAHKLINAHLRLVV
KIATTYKRYALPLNELISEGNIGMLQAIQRFNPDRGFRFTTYAIWWIKAAIQEYILHNWS
LVKIGTTAAQKKLFFNLRRVKSQIKAFSDTDLTPEQLETISEKLGVTTSEIQSMNQRLSA
QDHSLNTPMGNDSDYNEWQNMLVDDAINQEESYAEREELSQRHNILQKAMEGLKPREREI
LTERRLKDKPATLEELSKVYKISRERIRQIETRAFEKLQEIIQKAHGSDIGFKNSINQVA
IA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggttccttcaatgttagatatcacgccagaaaacaacattacacaatatatccagaat
atccgcaaatttcccctcttaacagctgaagaggaattcacctatgcgaaacagtggaaa
gaggagggaaatatccaggctgcacataaattgatcaacgcacatttaagattagtcgtt
aaaatagccacaacatacaaacgctatgccttgcccctgaatgaattgataagtgaggga
aatataggtatgcttcaagccatccaacgttttaatccagatcgtgggttccgatttaca
acctatgcaatttggtggattaaagcggctattcaggaatatattcttcacaactggtct
ttggttaaaatcgggacaaccgctgctcaaaaaaagctttttttcaatttacgtcgcgtt
aaaagccagattaaggcctttagtgacactgacctaaccccggaacaattggaaacaatt
tcggagaaacttggagtaactacatccgagattcaaagcatgaatcaacggctaagcgct
caagatcacagcctaaatacccctatgggaaacgacagtgattataacgaatggcagaat
atgctggttgatgacgccattaaccaggaagagagctatgccgaacgtgaagaactatcc
caacgtcataatattctacaaaaagcgatggaaggcttaaaacccagagaacgtgaaata
ttaacggagcgtaggttaaaagacaaacctgcaaccttggaagaactttcaaaagtctat
aaaatttccagagaacgtatccgtcagattgaaacccgtgcttttgaaaaattgcaagaa
attattcaaaaagcacatggttcagatattggatttaaaaactcaataaaccaagtagct
attgcctaa

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