Commensalibacter melissae AMU001: D9V35_05435
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Entry
D9V35_05435 CDS
T05684
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
coq
Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coq03016
]
D9V35_05435
Enzymes [BR:
coq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D9V35_05435
Transfer RNA biogenesis [BR:
coq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D9V35_05435
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Galanin
Motif
Other DBs
NCBI-ProteinID:
AYN86974
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All DBs
Position
1198005..1198667
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AA seq
220 aa
AA seq
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MKNNNKQILDHIHLYQHDIPSGLDLGKIVAIDTETMGLNYDRDRLCLIQLSKGDGQVHIV
QFVPERLGGKGFNSCPNLKKLLTDHSIAKLMHFARFDVGILQKTFQISMKSVICTKIAAK
LVRTFTDKHGLAVLCRELLDIELSKQQQTSDWGSPTLSIEQLTYAAADVLYLHQLWEILE
VLLIRENRLEIAEACFSFLPTRATLDQLGYLDPDIFDHRG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacaataaacaaattctcgatcatattcatctttaccagcatgatatacct
tccggactagatcttggaaaaatagtcgcaattgacactgagaccatgggattaaattat
gatcgagaccggctttgtttgattcagttaagcaaaggggatggacaggttcatattgtc
cagtttgtacccgaacggcttggtggtaaagggttcaattcctgccccaatctaaaaaaa
ttacttactgatcactccattgcaaaattaatgcactttgcccgatttgatgtcgggata
ttacaaaaaacctttcaaataagtatgaaatccgtaatttgtacaaaaattgcagctaaa
ttggtcagaacttttacggataaacacggactggctgttctatgcagagaattacttgat
attgaattaagtaaacagcaacaaacttcagattggggttcaccaaccctgagcattgaa
caattgacctatgcagctgcagatgttctttatcttcatcaattgtgggaaatcttggaa
gttttattaatcagggaaaaccgtttggaaattgcagaagcctgtttttcatttttacca
acaagagccaccctggatcagctcggatatctagatcctgatatattcgatcatcgcggt
taa
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