Candida orthopsilosis: CORT_0B00260
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Entry
CORT_0B00260 CDS
T02488
Name
(RefSeq) Msh2 DNA mismatch repair factor
KO
K08735
DNA mismatch repair protein MSH2
Organism
cot
Candida orthopsilosis
Pathway
cot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CORT_0B00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0B00260
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CORT_0B00260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Intimin_C
Motif
Other DBs
NCBI-GeneID:
14538084
NCBI-ProteinID:
XP_003867187
UniProt:
H8WZ81
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Position
2:complement(36519..39203)
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AA seq
894 aa
AA seq
DB search
MSSNIDVRFAGTGNEKQFIRQLHEKDASTIRFIDHNNKDYFTCLEDDAELIADEIYKTRS
VIKTSDKTKYVTISPQVFQTVLKFCLLEKQFRVEIYNNRTYQLLVSGTAGNLEGISKEYG
INFEFQDCSGSSIAAIKLQGNSVGVCIIEDSKIYLCEFEDNELYSNLEGLLLQFGIKEVV
LPNLSEKKLLQVINKIGNVVVSTISAFNTKNIEQDLVKLLEEDNIQMMFSSKGMKLTEYS
LSLSCCNALVAYLELLENDSKHFSVDKYDLSAYMKLDSSTIKALNVFPEFKSTSINSIFE
LLNKCKTSGGSRLLSQWLKQPLTNVEAIEERQSLVQLLMEDASLRVAVQNVLTQVPDIKR
LLKKMTIAIGKIGNENKKLEDLVRLYQLVLVLPDLIEVLKDQGDLVIKYWLDPISKHHQA
LLKFQELVETTVDLKGLSDLNSNFDIRPEFDASLVSINERKQSSLEQIKQLHLQVADDLN
MDSEKKLKLEQHQQHGYCLRLTRNDSVVLRNNKNYIELQTVKAGVYFTTAQLRKLSQVYS
NSCDEYNIKQRELIREVLSISLTYQGVFSVLSLDLSHLDVITSFANVALLAPTSFTKPKL
IPMDSKERRISLHDSRHPLLEVQDHVDFIPNDVSMGNKFFNIITGPNMGGKSTYLKQIAT
TGLMAQVGSFIPAESGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATSNS
LLIIDELGRGTSTYDGFGLAWSISEHLIQTKKCFALFATHFHELNKLAEKYPHSVENLHV
VAYVENKDDITLMYKIEPGISSKSFGINVAEMVKFPPKIINMAKRKADELQNDGNLKKSH
IDGKQLKSEVEELKSVLKKWREENHYDVSTASESLKELLKNTSNGYISELIQTL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaatatagatgtcaggtttgctggtacaggcaatgaaaagcaatttattaga
caactacatgagaaagatgcgtctaccataaggttcattgatcacaacaacaaggattat
tttacgtgtttagaagatgatgcagaattgattgcagatgaaatatacaaaactagatca
gtcatcaagacatcagacaaaacaaagtatgttacaatatctccacaagtgtttcaaact
gttttgaagttttgcttattggagaaacaatttagagtagagatttataacaatagaact
tatcagttattggttagtggtaccgctggtaatcttgaaggtataagtaaggaatatggt
ataaactttgaattccaagattgttctggctcatctattgctgcaatcaagttacaaggg
aattcggtcggtgtttgcattattgaggacagcaagatctatctttgtgaatttgaagac
aatgaattgtactcaaacttggaggggttgttgttacaatttggtatcaaggaggttgtt
ttgcctaatttgtccgagaagaagcttttgcaagtgatcaacaaaattggtaacgtcgta
gttagcacaatttctgcattcaataccaaaaatatagaacaggacttggtaaagttgttg
gaggaggataatattcagatgatgttttcatcaaagggtatgaaattgacagagtattca
ctttcattgtcgtgttgtaatgcacttgttgcttacttggaattacttgaaaacgattct
aaacacttttccgttgataaatatgatttgtcagcatatatgaaattggattcttctaca
atcaaagcattgaatgtatttcctgagttcaaatccacatctataaactccatatttgaa
cttctcaacaagtgcaagacttccggtggttcaagattgttgtcccaatggttgaaacag
cctttgactaatgttgaggctattgaagaacgtcaatcattggttcagttgttaatggag
gatgctagtttgagagtagctgtgcaaaatgtattgacgcaagttcctgacattaagaga
ttgttgaagaaaatgacaattgcaataggcaagataggtaatgagaataaaaaattggaa
gacttggtgagattgtaccagttggtgcttgtattaccggacttgattgaagtcttgaaa
gatcaaggtgatttagttatcaagtactggctagatcctatctcaaaacaccatcaggcg
ttactcaaatttcaagaacttgtcgaaacaacagttgaccttaaagggttgagtgaccta
aattcgaattttgacattagaccggaatttgatgcttcattggtatcgatcaatgaaaga
aagcagtcgtcgcttgagcaaataaaacaattgcatttgcaagtagctgatgatttgaat
atggatctggaaaagaaattgaagctagaacaacatcaacaacatggatattgcttaaga
cttaccagaaatgattcggttgtgttgcgtaataataaaaactacatcgaattacaaact
gtcaaagccggagtttatttcaccaccgcccaattaagaaagttgtctcaagtttattcc
aattcgtgtgatgaatataacatcaaacaacgagaattgattagagaagttctctccatt
tcattgacttatcaaggtgtattctcagtcttgagtttagatctttctcatttagacgtg
attacaagttttgcaaatgtggctctacttgctccaacatcattcaccaaaccaaaattg
attcccatggattcaaaagagagaagaataagccttcacgattcaagacaccctttgctt
gaagtacaagatcatgttgactttatcccaaatgacgtgctgatgggtaataaattcttc
aacataataacaggaccaaatatgggtggtaagtcaacgtatttgaaacagattgccact
actggattaatggcacaggtgggatcattcattcctgccgagctgggtgcagaattgccc
gtttttgatgcaattttatcgcgtgttggtgctggagattcacaattgaagggattgtca
acatttatgattgaaatgttggagacttcttccatattagctacagctacgtcaaactcg
ttattgattatcgatgagttgggaagaggaacttcaacctatgatgggtttgggcttgca
tggtcaattctggaacatcttattcaaaccaagaaatgctttgctttgtttgctacccat
ttccacgaattgaacaaacttgctgaaaaatacccacattcggttgagaatttacacgtt
gttgcttatgttgagaataaagatgatattacattgatgtataaaattgagcccggtatt
tcatccaaatcctttggtataaatgttgcagaaatggtgaaatttccacctaagattatc
aatatggccaaaaggaaagctgatgagttacaaaatgatggaaatttgaaaaagagtcat
attgatggtaaacaattgaagctggaagttgaagaattaaaatccgttttgaaaaagtgg
agagaggagaatcattatgatgtgtctactgctagtgaaagtttaaaagagttgttgaag
aatacatctaatgggtacatttcggagttgatacaaactttataa
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