Colwellia sp. Arc7-635: EKO29_16850
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Entry
EKO29_16850 CDS
T06022
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov02020
Two-component system
cov02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKO29_16850
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EKO29_16850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cov02022
]
EKO29_16850
02035 Bacterial motility proteins [BR:
cov02035
]
EKO29_16850
Two-component system [BR:
cov02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
EKO29_16850
Bacterial motility proteins [BR:
cov02035
]
Flagellar system
Flagellar assembly proteins
Others
EKO29_16850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
FleQ
HTH_24
Mg_chelatase
MerR
AAA
HTH_28
HTH_23
AAA_16
HTH_20
HTH_11
Sigma70_r4_2
AAA_7
HTH_Tnp_ISL3
HTH_AsnC-type
MCM
nSTAND3
GerE
OKR_DC_1_N
HTH_17
DUF2089
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AZQ85509
UniProt:
A0A3Q9GAS9
LinkDB
All DBs
Position
complement(3925118..3926458)
Genome browser
AA seq
446 aa
AA seq
DB search
MTTSKIMVVEDDAGLREALVDTLMLAGYQCLAVDSGEDALIKLKTHAVDLVVSDVQMGGM
SGLALLKSIRHSYPKLPVLMMTAYGTIDDAVQAMQDGACNYMAKPFAPEVLLNMVDQYVP
IQTNDRADPVVADAKSLELLSLAKKVANTEASVMVLGPSGSGKEVLAQYIHNYSPRSEAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAK
ILRVLQEREVERLGGRKTISLDVRVIATSNRDLKDAVQEGVFREDLYYRLNVFPLTWLPL
NERRDDILPLAKHLITRICQKDGNVIPEFTAAARSKLLAYDWPGNVRELDNVIQRALILQ
SDRCIDANDLLIDDFEPPKVLNESLESNKEDKLGSELKLQEHQIILDTLHACRGSRKDVA
ERLGISPRTLRYKIARMRDSGIQIPL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagtaaaattatggtagtcgaagatgatgccgggcttagagaggctcttgtt
gatactttgatgttagccggctatcaatgcttggcggttgattcaggcgaagatgcgctg
atcaagctaaaaactcatgccgttgatttagtggtgagcgatgtacaaatgggcggtatg
tcaggactggcattattgaagagtattcgtcatagctaccctaaattacctgtattgatg
atgacggcttacggcactatcgacgatgccgtacaagcgatgcaagatggcgcctgtaat
tatatggctaaaccatttgcaccagaagtgttactgaatatggttgatcaatatgtgcca
atacaaacgaatgatcgcgctgatcccgtcgtggcggatgcgaaaagtcttgaattatta
agcttagctaaaaaagtcgctaataccgaagcctctgttatggtgctaggtccaagtggt
tcaggtaaagaagtgctcgcacaatatatccataattattcgccacgtagcgaagcgcct
tttgtcgcaattaattgtgctgctatccctgaaaatatgcttgaagcgacattatttggt
tatgaaaaaggagcttttacgggagctattcaagcctgtcctggtaagtttgaacaagcg
cagggcggtactattttacttgatgaaatcaccgaaatggatttaggcttacaagcaaaa
attttgcgagtattacaagagcgtgaagtagagcgcttgggcgggcgtaaaaccattagt
ctagatgttagagtgatagccaccagtaaccgagatttaaaagatgctgttcaagagggc
gtttttagagaagatctctattatcgcttgaatgtatttccattaacttggttaccatta
aacgaacgcagagacgacattctccccttagcaaaacatcttattacacgaatttgtcaa
aaagacggtaatgtaattcctgaatttactgctgctgctcgcagtaagctattggcttat
gactggccgggtaatgtccgcgaattagataacgtgatacaaagagcgctgattttacaa
agtgatcgatgtatcgatgccaatgatttattgattgatgattttgagcctcctaaagtg
ctaaacgagagtttggaatcgaacaaagaggataagttaggtagcgaacttaagttacaa
gagcatcaaataattttggatacactacatgcttgtcgtggtagccgcaaagatgttgcg
gaacgtttaggcataagcccaagaaccttacgttataaaattgctcgtatgcgagacagt
ggtattcaaataccactgtaa
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